RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ACTL6AO96019 429 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SOD1P00441 154 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 C1RP00736 705 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 C1QCP02747 245 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BJP06899 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CD14P08571 375 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CELA3BP08861 270 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SBK3P0C264 359 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CT45A8P0DMV1 189 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CT45A9P0DMV2 189 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ALPPL2P10696 532 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 FABP4P15090 132 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 NCK1P16333 377 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 EPCAMP16422 314 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 MAOAP21397 527 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TACR2P21452 398 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 MMP11P24347 488 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 NFYBP25208 207 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 AK4P27144 223 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 DPP4P27487 766 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 IMPA1P29218 277 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 EPHA2P29317 976 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SHC1P29353 583 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TIMP3P35625 211 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ARL3P36405 182 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 THPOP40225 353 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 RPS10P46783 165 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SLC6A9P48067 706 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SULT1A1P50225 295 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF41P51814 821 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 AKR1C2P52895 323 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 UCP2P55851 309 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 C1QTNF8P60827 252 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 RAB10P61026 200 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ARF3P61204 181 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 YPEL5P62699 121 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H3AP68431 136 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ARF1P84077 181 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SSBP1Q04837 148 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 MXD1Q05195 221 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ABHD18Q0P651 414 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 RAB31Q13636 194 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 KLF9Q13886 244 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM132DQ14C87 1099 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SYPL1Q16563 259 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SMN1Q16637 294 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 RNF151Q2KHN1 245 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HYAL4Q2M3T9 481 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SOWAHAQ2M3V2 549 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRTGQ2VWP7 1150 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ATP6AP1LQ52LC2 224 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIKESHIQ53FT3 197 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 AWAT1Q58HT5 328 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CT45A2Q5DJT8 189 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ATXN7L2Q5T6C5 722 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRAMEF5Q5TYX0 476 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRAMEF17Q5VTA0 474 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SDHAF4Q5VUM1 108 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRAMEF6Q5VXH4 476 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 C18orf63Q68DL7 685 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM200BQ69YZ2 307 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 APOBEC3HQ6NTF7 200 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 KIRREL2Q6UWL6 708 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ENPP6Q6UWR7 440 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF534Q76KX8 674 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TRMT1LQ7Z2T5 733 aaKnown RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM144Q7Z5S9 345 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 GLCCI1Q86VQ1 547 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ARHGAP12Q8IWW6 846 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF100Q8IYN0 542 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 IZUMO1Q8IYV9 350 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 ZNF444Q8N0Y2 327 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 BATF2Q8N1L9 274 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 STPG3Q8N7X2 389 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 INO80EQ8NBZ0 244 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 KCTD6Q8NC69 237 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 NECAP1Q8NC96 275 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PLPP5Q8NEB5 264 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 OR4D5Q8NGN0 318 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 OR1K1Q8NGR3 316 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 OR52P1PQ8NH57 321 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 LYPD6BQ8NI32 183 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 NEIL3Q8TAT5 605 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SMIM4Q8WVI0 70 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SUSD6Q92537 303 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 RNFT2Q96EX2 444 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 CPNE2Q96FN4 548 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-219ENST00000542112 TMEM176AQ96HP8 235 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 IGSF21Q96ID5 467 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 SLC41A2Q96JW4 573 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRRC1Q96M27 445 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 AMDHD1Q96NU7 426 aa3.92□□□□□ -1.78
SNHG1-219ENST00000542112 PRAP1Q96NZ9 151 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms