RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RPS23P62266 143 aaKnown RBP15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 COX10Q12887 443 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 AQP6Q13520 282 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 MAD2L1BPQ15013 274 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 SLC36A3Q495N2 470 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 CCDC92Q53HC0 331 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 RGS7BPQ6MZT1 257 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 DNM1P34Q6PK57 102 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 VASH1Q7L8A9 365 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 ALDH16A1Q8IZ83 802 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 IQCF1Q8N6M8 205 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 SLC37A3Q8NCC5 494 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 WACQ9BTA9 647 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 FKBP7Q9Y680 259 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 LHFPL6Q9Y693 200 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 IGHV4-30-2A0A087WSY4 118 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 RNF223E7ERA6 249 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 RER1O15258 196 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 SGCEO43556 437 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 DOK2O60496 412 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 NGFP01138 241 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 LCKP06239 509 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 ADRA2AP08913 450 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 PYCR1P32322 319 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 RAD52P43351 418 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 ALDH3B1P43353 468 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 EVX1P49640 407 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 HIST1H3AP68431 136 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 SCRN3Q0VDG4 424 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 TMEM255AQ5JRV8 349 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 HIST2H3PS2Q5TEC6 136 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 CORO6Q6QEF8 472 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 HIST2H3AQ71DI3 136 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 MAPK1IP1LQ8NDC0 245 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 ICA1LQ8NDH6 482 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 OR2T33Q8NG76 320 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 OR10H5Q8NGA6 315 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 OR9Q1Q8NGQ5 310 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 SLC7A6Q92536 515 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 DUSP13Q9UII6 198 aa15.7■□□□□ 0.1
SNRPA1-203ENST00000540017 ZANQ9Y493 2812 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 SYNGR3O43761 229 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 COX5BP10606 129 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 ZNF250P15622 560 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 HTR5AP47898 357 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 TEKQ02763 1124 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 CRMP1Q14194 572 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 SPATA46Q5T0L3 261 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 LYPD4Q6UWN0 246 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 CCDC121Q6ZUS5 278 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 RFPL4BQ6ZWI9 263 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 OR1J1Q8NGS3 322 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 DUS3LQ96G46 650 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 RBM4Q9BWF3 364 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 REG4Q9BYZ8 158 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 NMNAT2Q9BZQ4 307 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 BCL2L14Q9BZR8 327 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 TPK1Q9H3S4 243 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 DYNLRB1Q9NP97 96 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 MRPL22Q9NWU5 206 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 PLEK2Q9NYT0 353 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 BAIAP2Q9UQB8 552 aa15.69■□□□□ 0.1
SNRPA1-203ENST00000540017 IGLV3-9A0A075B6K5 115 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 OR6C6A6NF89 314 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 ICMTO60725 284 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 DEAF1O75398 565 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 GYPBP06028 91 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 MPV17P39210 176 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 GLO1Q04760 184 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 ALKBH6Q3KRA9 238 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 ACSM5Q6NUN0 579 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 SHQ1Q6PI26 577 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 BIVMQ86UB2 503 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 LINC00346Q8IVM7 164 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 OR51L1Q8NGJ5 315 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 SYNPRQ8TBG9 265 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 TEX47Q8TBZ9 253 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 MARS2Q96GW9 593 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 C4orf45Q96LM5 186 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 EIF3KQ9UBQ5 218 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 KLHL21Q9UJP4 597 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 NDRG4Q9ULP0 352 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 POLR1DQ9Y2S0 133 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 AP4S1Q9Y587 144 aa15.68■□□□□ 0.1
SNRPA1-203ENST00000540017 A0A096LNT2 108 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 TVP23AA6NH52 213 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 H3BN98 237 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 M0R233 179 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 LY6G6DO95868 133 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 DBHP09172 617 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 CLUP10909 449 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 PSKH1P11801 424 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 ANXA8P13928 327 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 POU1F1P28069 291 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 GGT2P36268 569 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 KLF3P57682 345 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 ATP6AP1Q15904 470 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 CLEC2AQ6UVW9 174 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 CFAP77Q6ZQR2 320 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 Q71RC1 249 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms