RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 HTR2CP28335 458 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 GUCA1AP43080 201 aaPredicted RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 BTG1P62324 171 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SHBQ15464 509 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 GLT8D1Q68CQ7 371 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 TCEAL6Q6IPX3 200 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ABHD12BQ7Z5M8 362 aaPredicted RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 LRRTM1Q86UE6 522 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 UEVLDQ8IX04 471 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SLC43A2Q8N370 569 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 OR52N5Q8NH56 324 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 OR51E1Q8TCB6 317 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 CASTOR1Q8WTX7 329 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 TCEAL3Q969E4 200 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ELMOD3Q96FG2 381 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 LRFN5Q96NI6 719 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 OR2M2Q96R28 347 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SERINC1Q9NRX5 453 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 HHLA2Q9UM44 414 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 LRP4O75096 1905 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 H3BMH7 237 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SULT2B1O00204 365 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 GOSR2O14653 212 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 RER1O15258 196 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ARPC5O15511 151 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 MT-ATP6P00846 226 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 KLK3P07288 261 aaPredicted RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ABOP16442 354 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 EPHA8P29322 1005 aaPredicted RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 EMC4Q5J8M3 183 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF684Q5T5D7 378 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 NLRC3Q7RTR2 1065 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF283Q8N7M2 679 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SLC26A10Q8NG04 563 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 SCMH1Q96GD3 660 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 CYYR1Q96J86 154 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 RBM24Q9BX46 236 aaKnown RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF768Q9H5H4 540 aaKnown RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 PTGES2Q9H7Z7 377 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 MYOTQ9UBF9 498 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 WNT16Q9UBV4 365 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 IGLV1-36A0A0B4J1U3 117 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 TMEM272A0A1B0GTI8 110 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 A0A1W2PPC1 479 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 UBE2QL1A1L167 161 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 GGT3PA6NGU5 568 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF254O75437 659 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 CTAG2O75638 210 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 TRAPPC6AO75865 159 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 NAT1P18440 290 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 RFC3P40938 356 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 CLDN17P56750 224 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 EGR3Q06889 387 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 RIN1Q13671 783 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 BCL2A1Q16548 175 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 MOGAT2Q3SYC2 334 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 CDNFQ49AH0 187 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 TRIM61Q5EBN2 209 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 BATF2Q8N1L9 274 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 OR5L2Q8NGL0 311 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 BANF2Q9H503 90 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 CHST11Q9NPF2 352 aa7.79□□□□□ -1.16
UBE3B-208ENST00000538070 MRPS18BQ9Y676 258 aaKnown RBP7.79□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF814B7Z6K7 855 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 K7ESF4 209 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 EFNA2O43921 213 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 CREBL2O60519 120 aaPredicted RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RGS11O94810 467 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 ECDO95905 644 aaPredicted RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 HCKP08631 526 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RAB40ALP0C0E4 278 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 NAT2P11245 290 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF20P17024 532 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 SLC22A6Q4U2R8 563 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 BEX5Q5H9J7 111 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 OR52W1Q6IF63 320 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 DNM1P34Q6PK57 102 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 FAM57BQ71RH2 274 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RTN4RL2Q86UN3 420 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RNF128Q8TEB7 428 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 NUDCD2Q8WVJ2 157 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 ASB5Q8WWX0 329 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RAB40AQ8WXH6 277 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 EDAQ92838 391 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 SLAMF6Q96DU3 332 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 TMEM41AQ96HV5 264 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 TINAGL1Q9GZM7 467 aaPredicted RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 NIPAL2Q9H841 368 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 PLEKHA1Q9HB21 404 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 FBXO4Q9UKT5 387 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 CCSO14618 274 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 DXOO77932 396 aaKnown RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 GLSO94925 669 aaPredicted RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 FAM198BQ6UWH4 519 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RNF144BQ7Z419 303 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 FAM219AQ8IW50 185 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 C9orf62Q8N4C0 152 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 GVQW1Q8N7I0 195 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 DNASE2BQ8WZ79 361 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms