RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 OSBPL10Q9BXB5 764 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 C20orf96Q9NUD7 363 aaPredicted RBP2.67□□□□□ -1.98
PRKDC-205ENST00000535375 SHPKQ9UHJ6 478 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 WDR62O43379 1518 aa2.67□□□□□ -1.98
PRKDC-205ENST00000535375 CEMIPQ8WUJ3 1361 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 KCNE1BA0A087WTH5 132 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 GLYATL1P3A0A0U1RQE8 302 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 KBTBD11-OT1A0A1B0GTJ5 212 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SPECC1L-ADORA2AF8WAN1 911 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 H0YHG0 523 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 L7N2F9 121 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 AIM2O14862 343 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 PPP1R2P9O14990 202 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 LSM1O15116 133 aaKnown RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 RCBTB2O95199 551 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 UTS2O95399 124 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 CLIC3O95833 236 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SERPINA5P05154 406 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 TLX1NBP0CAT3 122 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 AK4P27144 223 aaPredicted RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 CLDN8P56748 225 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 RPS21P63220 83 aaKnown RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SLC25A11Q02978 314 aaKnown RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 TTLL9Q3SXZ7 439 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 XKR4Q5GH76 650 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SOHLH1Q5JUK2 328 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 PPM1LQ5SGD2 360 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 Q5W150 140 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SPECC1LQ69YQ0 1117 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 ZNF880Q6PDB4 577 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 FAM92BQ6ZTR7 304 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 NEGR1Q7Z3B1 354 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 PRELID2Q8N945 189 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 GLYATL2Q8WU03 294 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SDR42E1Q8WUS8 393 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 GEMIN6Q8WXD5 167 aaKnown RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 OR2A5Q96R48 311 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 ELOVL6Q9H5J4 265 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 UXTQ9UBK9 157 aaPredicted RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 CLN8Q9UBY8 286 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 LGALS13Q9UHV8 139 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 SLC17A4Q9Y2C5 497 aa2.66□□□□□ -1.98
PRKDC-205ENST00000535375 COL22A1Q8NFW1 1626 aaPredicted RBP2.66□□□□□ -1.98
PRKDC-205ENST00000535375 IGHV3-66A0A0C4DH42 116 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 A0A1B0GTQ1 180 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 INS-IGF2F8WCM5 200 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 SCAMP2O15127 329 aaKnown RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 HUS1O60921 280 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 SERPINE2P07093 398 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 DCNP07585 359 aaKnown RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 STAG3L3P0CL85 134 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 MYL2P10916 166 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 BCKDHBP21953 392 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 GTF2E2P29084 291 aaKnown RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 HRH1P35367 487 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 GPX4P36969 197 aaPredicted RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 CDKN1BP46527 198 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 NCBP2P52298 156 aaKnown RBP eCLIP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 CRISP1P54107 249 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 ACTG2P63267 376 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 COX19Q49B96 90 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 SHISA6Q6ZSJ9 500 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 LINC00173Q6ZV60 143 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 OTUD6AQ7L8S5 288 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 TMCO2Q7Z6W1 182 aaPredicted RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 MYOCDQ8IZQ8 938 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 BBOF1Q8ND07 529 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF502Q8TBZ5 544 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 SLC7A13Q8TCU3 470 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 OR10C1Q96KK4 312 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 P2RX4Q99571 388 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 ANKRD60Q9BZ19 345 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 MRPL37Q9BZE1 423 aaKnown RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 LYRM4Q9HD34 91 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 PTTG3PQ9NZH4 202 aa2.65□□□□□ -1.99
PRKDC-205ENST00000535375 PDP1Q9P0J1 537 aaPredicted RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 MN1Q10571 1320 aaPredicted RBP2.65□□□□□ -1.99
PRKDC-205ENST00000535375 PLEKHG2Q9H7P9 1386 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 IGHV5-51A0A0C4DH38 117 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF816-ZNF321PA0A0X1KG74 233 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 CIB4A0PJX0 185 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 AQP8O94778 261 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF250P15622 560 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 TCN2P20062 427 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 GSTM3P21266 225 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 UQCRFS1P47985 274 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 CYB561P49447 251 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 IRF8Q02556 426 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF726P1Q15940 193 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 CMTM1Q8IZ96 169 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 STPG2Q8N412 459 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 C8orf31Q8N9H6 132 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 LKAAEAR1Q8TD35 194 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 CAPSLQ8WWF8 208 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 WFIKKN1Q96NZ8 548 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 TSSK3Q96PN8 268 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 XPO6Q96QU8 1125 aaKnown RBP2.64□□□□□ -1.99
PRKDC-205ENST00000535375 TEKT3Q9BXF9 490 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 GABARAPL3Q9BY60 117 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 LINC00597Q9H2U6 94 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms