RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	FZR1	Q9UM11	496 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	MTOR	P42345	2549 aa		12.48	□□□□□ -0.41
CTSB-231	ENST00000534382	FAM171A2	A8MVW0	826 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382		M0R233	179 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	SYNGR3	O43761	229 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	DOK2	O60496	412 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	LY6H	O94772	140 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ERCC1	P07992	297 aa	Predicted RBP	12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ADRA2A	P08913	450 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	GAA	P10253	952 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ZNF250	P15622	560 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	WNT5A	P41221	380 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ARHGDIA	P52565	204 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	SELENOV	P59797	346 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ERVS71-1	P61550	626 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	DBP	Q10586	325 aa	Predicted RBP	12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	MEP1B	Q16820	701 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	C1orf146	Q5VVC0	180 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	UNQ6126/PRO20091	Q6UXV3	157 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	CCDC121	Q6ZUS5	278 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ASRGL1	Q7L266	308 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	VASH1	Q7L8A9	365 aa	Predicted RBP	12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ZNF101	Q8IZC7	436 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ZNF525	Q8N782	197 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	CYB561A3	Q8NBI2	242 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	ICA1L	Q8NDH6	482 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	SLC26A10	Q8NG04	563 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	OR1J1	Q8NGS3	322 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	OR4Q3	Q8NH05	313 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	SMR3A	Q99954	134 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	REG4	Q9BYZ8	158 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	MS4A5	Q9H3V2	200 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	FN3K	Q9H479	309 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	PLEK2	Q9NYT0	353 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	MYEF2	Q9P2K5	600 aa	Known RBP	12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	REV1	Q9UBZ9	1251 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	KLHL21	Q9UJP4	597 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	NDRG4	Q9ULP0	352 aa	Known RBP	12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	POLR1D	Q9Y2S0	133 aa		12.47	□□□□□ -0.41
CTSB-231	ENST00000534382	IGLV3-9	A0A075B6K5	115 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	IGHV4-30-2	A0A087WSY4	118 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	RNF223	E7ERA6	249 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ICMT	O60725	284 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	DEAF1	O75398	565 aa	Predicted RBP	12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	TIPRL	O75663	272 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	TF	P02787	698 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	CSF3	P09919	207 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ANXA8	P13928	327 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	PRKACG	P22612	351 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ALDH3B1	P43353	468 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	HTR5A	P47898	357 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	TEK	Q02763	1124 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	SLC36A3	Q495N2	470 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	CCDC92	Q53HC0	331 aa	Predicted RBP	12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ARL9	Q6T311	187 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	C1orf174	Q8IYL3	243 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	HS3ST5	Q8IZT8	346 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	SLC37A3	Q8NCC5	494 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	SYNPR	Q8TBG9	265 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	TEX47	Q8TBZ9	253 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	NEU4	Q8WWR8	484 aa	Predicted RBP	12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	FAM168A	Q92567	244 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	NRBF2	Q96F24	287 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	C4orf45	Q96LM5	186 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ZNF556	Q9HAH1	456 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	ELOVL3	Q9HB03	270 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382	NTN4	Q9HB63	628 aa		12.46	□□□□□ -0.41
CTSB-231	ENST00000534382		A0A1W2PPW3	197 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382		H3BN98	237 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	RER1	O15258	196 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	CIB2	O75838	187 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	CLPTM1	O96005	669 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	HLA-DQA2	P01906	255 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	KLF3	P57682	345 aa	Predicted RBP	12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	HIST1H3A	P68431	136 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	CCNI	Q14094	377 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	CRMP1	Q14194	572 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	ZNF718	Q3SXZ3	478 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	HIST2H3PS2	Q5TEC6	136 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	SHQ1	Q6PI26	577 aa	Known RBP	12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	CLEC9A	Q6UXN8	241 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	HIST2H3A	Q71DI3	136 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	ATG16L2	Q8NAA4	619 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	GJC3	Q8NFK1	279 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	OR2T4	Q8NH00	348 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	OR1F12	Q8NHA8	337 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	C10orf105	Q8TEF2	133 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	UTP4	Q969X6	686 aa	Known RBP	12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	DUS3L	Q96G46	650 aa	Known RBP	12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	CDADC1	Q9BWV3	514 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	SLCO1C1	Q9NYB5	712 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	TAAR3P	Q9P1P4	343 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	ATPIF1	Q9UII2	106 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	GPR160	Q9UJ42	338 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	AP4S1	Q9Y587	144 aa		12.45	□□□□□ -0.42
CTSB-231	ENST00000534382	LHFPL6	Q9Y693	200 aa		12.45	□□□□□ -0.42

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