RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PRRX1P54821 245 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 PLP1P60201 277 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 UBE2NP61088 152 aaKnown RBP1.27□□□□□ -2.21
BRCA2-205ENST00000533776 ACTR1AP61163 376 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 SLC25A11Q02978 314 aaKnown RBP1.27□□□□□ -2.21
BRCA2-205ENST00000533776 ZNF616Q08AN1 781 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 SLC39A6Q13433 755 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 KDELC1Q6UW63 502 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 RGS9BPQ6ZS82 235 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 SNX20Q7Z614 316 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 ZCCHC7Q8N3Z6 543 aaKnown RBP1.27□□□□□ -2.21
BRCA2-205ENST00000533776 LIX1Q8N485 282 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 MIR7-3HGQ8N6C7 128 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 OR5B3Q8NH48 314 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 LILRB4Q8NHJ6 448 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 SLC7A13Q8TCU3 470 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 NTAN1Q96AB6 310 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 OR5B12Q96R08 314 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 CDX2Q99626 313 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-205ENST00000533776 ZNF717Q9BY31 904 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-205ENST00000533776 NT5C3AQ9H0P0 336 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 OR52D1Q9H346 318 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 SLC38A10Q9HBR0 1119 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 ETNK2Q9NVF9 386 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 KLHL28Q9NXS3 571 aa1.27□□□□□ -2.21
BRCA2-205ENST00000533776 TRMT112Q9UI30 125 aaKnown RBP1.27□□□□□ -2.21
BRCA2-205ENST00000533776 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 MAPK8IP3Q9UPT6 1336 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 IGKV3D-11A0A0A0MRZ8 115 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 IGHV1OR15-9A0A0B4J2B8 117 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 GLYATL1P3A0A0U1RQE8 302 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 C5orf63A6NC05 138 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 ZNF716A6NP11 495 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 MRPS12O15235 138 aaKnown RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 RDH16O75452 317 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CLPXO76031 633 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 HLA-DQB1P01920 261 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CD3GP09693 182 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 OR8U9P0C7N5 309 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 ZNF735P0CB33 412 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 MCF2P10911 925 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 WARSP23381 471 aaKnown RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 F2RP25116 425 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CRYBB2P43320 205 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CCNHP51946 323 aaPredicted RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 BST1Q10588 318 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 MAJINQ3KP22 176 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 AP1ARQ63HQ0 302 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CENPPQ6IPU0 288 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CASC1Q6TDU7 716 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 UNQ9165/PRO28630Q6UXU0 137 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 NBPF5PQ86XG9 351 aaPredicted RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CDKL3Q8IVW4 592 aaPredicted RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 B3GNT7Q8NFL0 401 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 OR13G1Q8NGZ3 307 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 LRRC29Q8WV35 223 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 SHC3Q92529 594 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 MRGPRFQ96AM1 343 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 TUBGCP3Q96CW5 907 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 CCDC126Q96EE4 140 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 ZBTB18Q99592 522 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 ATP5SQ99766 215 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 LRRC40Q9H9A6 602 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 EDA2RQ9HAV5 297 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 FGF20Q9NP95 211 aaPredicted RBP1.26□□□□□ -2.21
BRCA2-205ENST00000533776 HYPKQ9NX55 129 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 NUP50Q9UKX7 468 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 HYOU1Q9Y4L1 999 aa1.26□□□□□ -2.21
BRCA2-205ENST00000533776 KANK1Q14678 1352 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 OR6C74A6NCV1 312 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 H0YJW9 148 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 POLR1CO15160 346 aaPredicted RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 NUPL2O15504 423 aaKnown RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 SOCS1O15524 211 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 CD74P04233 296 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 EIF4EP06730 217 aaKnown RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 CHMLP26374 656 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 HCAR3P49019 387 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 CCNG1P51959 295 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 CDKN2DP55273 166 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 VSX2P58304 361 aaPredicted RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 BST2Q10589 180 aaKnown RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 ZMYND11Q15326 602 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 CEP55Q53EZ4 464 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 MPV17L2Q567V2 206 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 Q6ZSR3 168 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 SLC16A13Q7RTY0 426 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 OR9A2Q8NGT5 310 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 OR6N1Q8NGY5 312 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 NT5C3BQ969T7 300 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 PTX4Q96A99 478 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 SLC25A46Q96AG3 418 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 SEH1LQ96EE3 360 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 TBL1YQ9BQ87 522 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 GCOM2Q9BZD3 368 aaPredicted RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 FGF23Q9GZV9 251 aaPredicted RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 SAMSN1Q9NSI8 373 aaKnown RBP1.25□□□□□ -2.21
BRCA2-205ENST00000533776 ENOPH1Q9UHY7 261 aa1.25□□□□□ -2.21
BRCA2-205ENST00000533776 TRAV19A0A0A6YYK7 116 aa1.24□□□□□ -2.21
BRCA2-205ENST00000533776 IGLV1-36A0A0B4J1U3 117 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms