RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 NKX2-8O15522 239 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 RAF1P04049 648 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 EIF4EP06730 217 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 SP1P08047 785 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 H2BFMP0C1H6 154 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 SELENOPP49908 381 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 NOVA1P51513 510 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF133P52736 654 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 SOX8P57073 446 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 C10orf128Q5T292 105 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 AGAP7PQ5VUJ5 663 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF544Q6NX49 715 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 STAC2Q6ZMT1 411 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 TMPRSS7Q7RTY8 843 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 GALNTL5Q7Z4T8 443 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 OR6N1Q8NGY5 312 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 AGAP4Q96P64 663 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 TCF7L1Q9HCS4 588 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 G6PC2Q9NQR9 355 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 CYSLTR2Q9NS75 346 aa13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 FOXD3Q9UJU5 478 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 GDF2Q9UK05 429 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-213ENST00000529611 ANKRD61A6NGH8 418 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 FAM166BA8MTA8 275 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 LINC01387J3KSC0 135 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 NME2P1O60361 137 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 PTTG1O95997 202 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 CSF3P09919 207 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 PRKAR1AP10644 381 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 SNRPBP14678 240 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 NME2P22392 152 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 PTBP1P26599 531 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 MAGEA5P43359 124 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 RRADP55042 308 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 DEFA1P59665 94 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 DEFA3P59666 94 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 RIN1Q13671 783 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 IL18Q14116 193 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 ABLIM2Q6H8Q1 611 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 SLC25A25Q6KCM7 469 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF433Q8N7K0 673 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 OR5H6Q8NGV6 325 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 IRF2BPLQ9H1B7 796 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 ABRACLQ9P1F3 81 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 EXTL2Q9UBQ6 330 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 POLR1DQ9Y2S0 133 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 KLF13Q9Y2Y9 288 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 FLVCR1Q9Y5Y0 555 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 FAM186AA6NE01 2351 aa13.68□□□□□ -0.22
CCDC90B-213ENST00000529611 TRAV8-7A0A075B6U6 113 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 A0A1W2PQ09 198 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF716A6NP11 495 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 CDK2AP1O14519 115 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 ADRA2CP18825 462 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 WT1P19544 449 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 NPR2P20594 1047 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 LRRTM1Q86UE6 522 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 TMEM251Q8N6I4 163 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 TSEN15Q8WW01 171 aaKnown RBP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 ROBO4Q8WZ75 1007 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 BRD7Q9NPI1 651 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 ASH2LQ9UBL3 628 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 V9GY05 133 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 CUL9Q8IWT3 2517 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 TMEM269A0A1B0GVZ9 245 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 IFITM5A6NNB3 132 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 AIPO00170 330 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 PFDN1O60925 122 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 GLSO94925 669 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 NTF4P34130 210 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 MEOX1P50221 254 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 MMP16P51512 607 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 CDC20Q12834 499 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 OR4M1Q8NGD0 313 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 OR2AJ1Q8NGZ0 328 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 THRSPQ92748 146 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF775Q96BV0 537 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF552Q9H707 407 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 OR52A1Q9UKL2 312 aa13.67□□□□□ -0.22
CCDC90B-213ENST00000529611 NCOA6Q14686 2063 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 ARPC4-TTLL3A0A0A6YYG9 625 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 DCTDP32321 178 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 LHX2P50458 406 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 HES5Q5TA89 166 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 FOXL2NBQ6ZUU3 175 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 GDPD3Q7L5L3 318 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 Q8N402 240 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 SETD6Q8TBK2 473 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 ASB5Q8WWX0 329 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 CPNE4Q96A23 557 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 PNPLA2Q96AD5 504 aa13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 INTS12Q96CB8 462 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-213ENST00000529611 ZNF845Q96IR2 970 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms