RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 GOSR1O95249 250 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 PLAUP00749 431 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 CD3EP07766 207 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 ZNF823P16415 610 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 PTAFRP25105 342 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 GSTT1P30711 240 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
USF1-209ENST00000529476 BLVRAP53004 296 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 ADAM8P78325 824 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 NAAAQ02083 359 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 AQP6Q13520 282 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 C3orf36Q3SXR2 165 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 SLC35D3Q5M8T2 416 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 NXNL2Q5VZ03 156 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 ZNF774Q6NX45 483 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 SYT9Q86SS6 491 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 CPEB3Q8NE35 698 aaKnown RBP12.16□□□□□ -0.46
USF1-209ENST00000529476 DNAJC27Q9NZQ0 273 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 AASSQ9UDR5 926 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 ATP6V1G2-DDX39BF2Z307 99 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 ZNF593O00488 134 aaPredicted RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 RER1O15258 196 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 SELENOFO60613 162 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 CLIC3O95833 236 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 SERPINA5P05154 406 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 SPARCP09486 303 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 APEX1P27695 318 aaKnown RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 SSTR2P30874 369 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 CALCRP30988 508 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 ENTPD1P49961 510 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 AQP4P55087 323 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 SNRPGP62308 76 aaKnown RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 ADARB1P78563 741 aaKnown RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 PLP2Q04941 152 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 SCRN3Q0VDG4 424 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 KEAP1Q14145 624 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 TESK1Q15569 626 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 CCDC92Q53HC0 331 aaPredicted RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 SLC18B1Q6NT16 456 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 ADAM5Q6NVV9 412 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 MEPCEQ7L2J0 689 aaKnown RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 TMEM200AQ86VY9 491 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 ERI1Q8IV48 349 aaKnown RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 DEPDC4Q8N2C3 294 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 DHRSXQ8N5I4 330 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 TRUB1Q8WWH5 349 aaKnown RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 ZNF582Q96NG8 517 aaPredicted RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 TEAD3Q99594 435 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 TMEM204Q9BSN7 226 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 WACQ9BTA9 647 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 ADI1Q9BV57 179 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 CDADC1Q9BWV3 514 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 CLEC4MQ9H2X3 399 aaPredicted RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 MARCH7Q9H992 704 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 H2AFY2Q9P0M6 372 aaPredicted RBP12.15□□□□□ -0.46
USF1-209ENST00000529476 CYB5R1Q9UHQ9 305 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 KCNG2Q9UJ96 466 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 NAV3Q8IVL0 2385 aa12.15□□□□□ -0.46
USF1-209ENST00000529476 HRNRQ86YZ3 2850 aaPredicted RBP12.14□□□□□ -0.47
USF1-209ENST00000529476 IGHV2OR16-5A0A0B4J2B6 119 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 IQCMA0A1B0GVH7 501 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 SHISA9B4DS77 424 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 SGCEO43556 437 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 DOK2O60496 412 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 CCL2P13500 99 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 NAA10P41227 235 aaPredicted RBP12.14□□□□□ -0.47
USF1-209ENST00000529476 HIST1H3AP68431 136 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 HIST2H3PS2Q5TEC6 136 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 LCN1P1Q5VSP4 162 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 TTC23Q5W5X9 447 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 TMEM154Q6P9G4 183 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 SLC22A25Q6T423 547 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
USF1-209ENST00000529476 CFAP77Q6ZQR2 320 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 HIST2H3AQ71DI3 136 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 VASH1Q7L8A9 365 aaPredicted RBP12.14□□□□□ -0.47
USF1-209ENST00000529476 GID4Q8IVV7 300 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 TIGD4Q8IY51 512 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 ENTHD1Q8IYW4 607 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 SLC30A7Q8NEW0 376 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 GJC3Q8NFK1 279 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 OR6N2Q8NGY6 317 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 OR2AJ1Q8NGZ0 328 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 SMAP2Q8WU79 429 aaPredicted RBP12.14□□□□□ -0.47
USF1-209ENST00000529476 NEUROG1Q92886 237 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 RADILQ96JH8 1075 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 INTS14Q96SY0 518 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 VCX3BQ9H321 246 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 PLEK2Q9NYT0 353 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 GDF2Q9UK05 429 aaPredicted RBP12.14□□□□□ -0.47
USF1-209ENST00000529476 RTTNQ86VV8 2226 aa12.14□□□□□ -0.47
USF1-209ENST00000529476 DCHS2Q6V1P9 2916 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 LOC100509620A0A075B734 347 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 ENTPD6O75354 484 aa12.13□□□□□ -0.47
USF1-209ENST00000529476 CRYAAP02489 173 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms