RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 VCX3AQ9NNX9 186 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FAM60AQ9NP50 221 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR2S2Q9NQN1 319 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FAM114A2Q9NRY5 505 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FAM49BQ9NUQ9 324 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPATA7Q9P0W8 599 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TEKT2Q9UIF3 430 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GMPPBQ9Y5P6 360 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPG11Q96JI7 2443 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 KIF7Q2M1P5 1343 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LCTP09848 1927 aa-1.46□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TRAV19A0A0A6YYK7 116 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CCDC196A0A1B0GTZ2 297 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TLDC2A0PJX2 215 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TSPAN11A1L157 253 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ANKRD62A6NC57 917 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR2T8A6NH00 312 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 A8MWL6 223 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RAB3DO95716 219 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 IGLV3-1P01715 115 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CLEC3BP05452 202 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CLTBP09497 229 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RRASP10301 218 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPP1P10451 314 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPNP16150 400 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CD36P16671 472 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 KITLGP21583 273 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RFC4P35249 363 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PPARGP37231 505 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HINT1P49773 126 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SERPINB9P50453 376 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RORCP51449 518 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CCR8P51685 355 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ZNF138P52744 262 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GBE1Q04446 702 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TMEM267Q0VDI3 215 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPP2Q13103 211 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 IRF3Q14653 427 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CRYMQ14894 314 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 UBE2V2Q15819 145 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 Q1T7F1 81 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PARP15Q460N3 678 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PTPN20Q4JDL3 420 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TRMT12Q53H54 448 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ALFQ53S48 1182 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SAMD4BQ5PRF9 694 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RNF187Q5TA31 235 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 AADACL4Q5VUY2 407 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PM20D1Q6GTS8 502 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LEG1Q6P5S2 330 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PLET1Q6UQ28 207 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FBXW12Q6X9E4 464 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 Q6ZN92 141 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 VMO1Q7Z5L0 202 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FAM219AQ8IW50 185 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ZADH2Q8N4Q0 377 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 C9orf163Q8N9P6 203 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MSANTD4Q8NCY6 345 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR2K2Q8NGT1 345 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR6K6Q8NGW6 343 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR4L1Q8NH43 312 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 URGCPQ8TCY9 931 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TEKT4Q8WW24 435 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MAIP1Q8WWC4 291 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ZNF622Q969S3 477 aaKnown RBP eCLIP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 NTAN1Q96AB6 310 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPSB1Q96BD6 273 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MRPL38Q96DV4 380 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ELMO2Q96JJ3 720 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPATA13Q96N96 652 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ZNF830Q96NB3 372 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 Q96NJ1 140 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPRR2FQ96RM1 72 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ATG10Q9H0Y0 220 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PDCL3Q9H2J4 239 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TRABDQ9H4I3 376 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CYP3A43Q9HB55 503 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RDH14Q9HBH5 336 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RAB9BQ9NP90 201 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RPRD1BQ9NQG5 326 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GPR173Q9NS66 373 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ACOXLQ9NUZ1 547 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GEMIN8Q9NWZ8 242 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TAS2R5Q9NYW4 299 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GDE1Q9NZC3 331 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 XPO7Q9UIA9 1087 aaKnown RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PACSIN2Q9UNF0 486 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RHBDD3Q9Y3P4 386 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FADS3Q9Y5Q0 445 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 AK9Q5TCS8 1911 aa-1.47□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MROH5Q6ZUA9 1318 aa-1.47□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ZNF532Q9HCE3 1301 aa-1.47□□□□□ -2.65
RNU6-1238P-201ENST00000517215 LOC285556D6RIA3 1793 aa-1.47□□□□□ -2.65
RNU6-1238P-201ENST00000517215 RIF1Q5UIP0 2472 aaKnown RBP-1.47□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NBEAL2Q6ZNJ1 2754 aa-1.47□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ATP10DQ9P241 1426 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 A0A075B6Q4 140 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 A0A087WSZ3 146 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 TRAPPC13A5PLN9 417 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 KRBOX1C9JBD0 128 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms