RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 LYRM1O43325 122 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZNF749O43361 778 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SCO2O43819 266 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GPRIN2O60269 458 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 LMX1BO60663 402 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GALR3O60755 368 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 CTSVO60911 334 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CTNSO60931 367 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NDUFS7O75251 213 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SC5DO75845 299 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GATBO75879 557 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 ARL6IP5O75915 188 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NDUFB2O95178 105 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 LALBAP00709 142 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 HIST1H2ABP04908 130 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CA3P07451 260 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SP1P08047 785 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SBK2P0C263 348 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OR2T7P0C7T2 308 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GSTT2P0CG29 244 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GSTT2BP0CG30 244 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SLC2A2P11168 524 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 IFI30P13284 250 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GNSP15586 552 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZNF3P17036 446 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 POLR2CP19387 275 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 CELP19835 753 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NPR2P20594 1047 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MAGP20916 626 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MAOAP21397 527 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NT5EP21589 574 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TBXA2RP21731 343 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SLC2A5P22732 501 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MYL9P24844 172 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 RBMS1P29558 406 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 ATP6V1E1P36543 226 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TALDO1P37837 337 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GPR4P46093 362 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TGM4P49221 684 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GPR143P51810 404 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ATP12AP54707 1039 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FXYD6P3P58550 94 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 SRP54P61011 504 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 ACTA2P62736 377 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ACTG2P63267 376 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CSNK2A1P68400 391 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 MRPS10P82664 201 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 PITPNAQ00169 270 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 IFITM2Q01629 132 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CD300CQ08708 224 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FAM53BQ14153 422 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CDK10Q15131 360 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZNHIT3Q15649 155 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 LTB4RQ15722 352 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZNF141Q15928 474 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MAPK14Q16539 360 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZFP69Q49AA0 526 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CCDC58Q4VC31 144 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TRMT12Q53H54 448 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 PYDC2Q56P42 97 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MRPL2Q5T653 305 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 STPG1Q5TH74 334 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TRIQKQ629K1 86 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SLC30A6Q6NXT4 461 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 RPL22L1Q6P5R6 122 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 ULK3Q6PHR2 472 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CNIH2Q6PI25 160 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 C16orf54Q6UWD8 224 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 UNQ9370/PRO34162Q6UXP9 181 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GLDNQ6ZMI3 551 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 PQLC2Q6ZP29 291 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FOXL2NBQ6ZUU3 175 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 HIST3H2AQ7L7L0 130 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NANOGNBQ7Z5D8 188 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OAFQ86UD1 273 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 LHFPL3Q86UP9 236 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OOSP2Q86WS3 158 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZNF595Q8IYB9 648 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CA13Q8N1Q1 262 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 Q8N402 240 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 EID2Q8N6I1 236 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 POMGNT2Q8NAT1 580 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SYT14Q8NB59 555 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CSNK2A3Q8NEV1 391 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OR4F15Q8NGB8 312 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OR51G2Q8NGK0 314 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OR2T27Q8NH04 317 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 OR4C6Q8NH72 309 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GRPEL2Q8TAA5 225 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NEIL3Q8TAT5 605 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ENKURQ8TC29 256 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 FANK1Q8TC84 345 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 RPS4Y2Q8TD47 263 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 C15orf40Q8WUR7 153 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TMEM255BQ8WV15 326 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 LIPHQ8WWY8 451 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 THRSPQ92748 146 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 KLK6Q92876 244 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms