RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MT-ATP6P00846 226 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 IGHV4-38-2P0DP08 117 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 HSD17B1P14061 328 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 CD247P20963 164 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 CPT2P23786 658 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 PRKAR1BP31321 381 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 CD80P33681 288 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 APLNRP35414 380 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 LRRC23Q53EV4 343 aaPredicted RBP11.7□□□□□ -0.54
SPCS3-204ENST00000513139 ESCO2Q56NI9 601 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 INTS11Q5TA45 600 aaKnown RBP11.7□□□□□ -0.54
SPCS3-204ENST00000513139 ASPHD2Q6ICH7 369 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 DHRS4L2Q6PKH6 230 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 SLC16A14Q7RTX9 510 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 GPR32P1Q8NGA4 272 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 OR4K5Q8NGD3 323 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF566Q969W8 418 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 ITPKCQ96DU7 683 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 SLC25A44Q96H78 314 aaPredicted RBP11.7□□□□□ -0.54
SPCS3-204ENST00000513139 BTBD10Q9BSF8 475 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 TMEM43Q9BTV4 400 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 SPATA5L1Q9BVQ7 753 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 SLC19A3Q9BZV2 496 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 SELENONQ9NZV5 590 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 OR5V1Q9UGF6 321 aa11.7□□□□□ -0.54
SPCS3-204ENST00000513139 EBAG9O00559 213 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 SERPINI2O75830 405 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 ADORA3P0DMS8 318 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 RPL15P61313 204 aaKnown RBP11.69□□□□□ -0.54
SPCS3-204ENST00000513139 SEC61A1P61619 476 aaKnown RBP11.69□□□□□ -0.54
SPCS3-204ENST00000513139 PAX2Q02962 417 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 CYBRD1Q53TN4 286 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 TMEM255AQ5JRV8 349 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 THEM4Q5T1C6 240 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 GLYATQ6IB77 296 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 LRRN1Q6UXK5 716 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 SLC35D2Q76EJ3 337 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF283Q8N7M2 679 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 OR5J2Q8NH18 312 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 KLF14Q8TD94 323 aaPredicted RBP11.69□□□□□ -0.54
SPCS3-204ENST00000513139 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 IPCEF1Q8WWN9 437 aaPredicted RBP11.69□□□□□ -0.54
SPCS3-204ENST00000513139 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 EIF3KQ9UBQ5 218 aaKnown RBP11.69□□□□□ -0.54
SPCS3-204ENST00000513139 LRCH1Q9Y2L9 728 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 PLXNB1O43157 2135 aa11.69□□□□□ -0.54
SPCS3-204ENST00000513139 A0A0B4J2E0 115 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 A0A1B0GX12 115 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 SLC22A31A6NKX4 558 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 GSC2O15499 205 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 ATP5HO75947 161 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 MMP7P09237 267 aaPredicted RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 QDPRP09417 244 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 TNFRSF1BP20333 461 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 STOMP27105 288 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 MPV17P39210 176 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 BPIFB3P59826 476 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 BTG1P62324 171 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 RELBQ01201 579 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 MS4A2Q01362 244 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 HLXQ14774 488 aaPredicted RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 PDCD1Q15116 288 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 TAF9Q16594 264 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 CCDC121Q6ZUS5 278 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 RBM45Q8IUH3 476 aaKnown RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF101Q8IZC7 436 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 TMEM86BQ8N661 226 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 OR4D11Q8NGI4 311 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 GEMIN6Q8WXD5 167 aaKnown RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 FAM162AQ96A26 154 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 CADM1Q9BY67 442 aaKnown RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 TMEM27Q9HBJ8 222 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 NOX4Q9NPH5 578 aa11.68□□□□□ -0.54
SPCS3-204ENST00000513139 PRPF19Q9UMS4 504 aaKnown RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 SOX21Q9Y651 276 aaPredicted RBP11.68□□□□□ -0.54
SPCS3-204ENST00000513139 IGHV3OR16-10A0A075B7F0 116 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 C11orf98E9PRG8 122 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 M0R3H8 397 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 TPST2O60704 377 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 ICMTO60725 284 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 DNAJC8O75937 253 aaPredicted RBP11.67□□□□□ -0.54
SPCS3-204ENST00000513139 OR6A2O95222 327 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF682O95780 498 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SERPINA1P01009 418 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SELEP16581 610 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 TNFRSF1AP19438 455 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 CCNOP22674 350 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 WNT5AP41221 380 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF84P51523 738 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 NCALDP61601 193 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 TNFAIP6P98066 277 aaPredicted RBP11.67□□□□□ -0.54
SPCS3-204ENST00000513139 HSF2Q03933 536 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 ZMYND11Q15326 602 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 HIST3H3Q16695 136 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SPATS1Q496A3 300 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms