RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HDAC3O15379 428 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 FMO6PO60774 539 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 SCG5P05408 212 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 KITP10721 976 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 UMPSP11172 480 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 MMP9P14780 707 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 PMELP40967 661 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 AQP2P41181 271 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 PITPNBP48739 271 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 PCBP3P57721 371 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 HOXA4Q00056 320 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 IFFO1Q0D2I5 559 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 ENDOGQ14249 297 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 UNQ6126/PRO20091Q6UXV3 157 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 ARMC8Q8IUR7 673 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 MOSPD2Q8NHP6 518 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 ADAMTS16Q8TE57 1224 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 SSMEM1Q8WWF3 244 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 FAM71F1Q96KD3 344 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 OR52B2Q96RD2 323 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 PRSS27Q9BQR3 290 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 PCGF1Q9BSM1 259 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 ROPN1BQ9BZX4 212 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 ROPN1Q9HAT0 212 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 ELOVL3Q9HB03 270 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 MAN2C1Q9NTJ4 1040 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 MIOXQ9UGB7 285 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 SLC7A7Q9UM01 511 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 STARD10Q9Y365 291 aa15.79■□□□□ 0.12
HMGCS1-206ENST00000511774 CENPVL3A0A0U1RRI6 287 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 A0A1W2PRG6 482 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 PRORSD1PA6NEY8 169 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 CENPBD1B2RD01 187 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 OPN1SWP03999 348 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 CFHR2P36980 270 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 RPL15P61313 204 aaKnown RBP15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 FAM189A2Q15884 450 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 C2orf68Q2NKX9 166 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 ZNF404Q494X3 552 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 LRIF1Q5T3J3 769 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 WDR25Q64LD2 544 aaPredicted RBP15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 TTC33Q6PID6 262 aaPredicted RBP15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 ZER1Q7Z7L7 766 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 OR5AS1Q8N127 324 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 ZSCAN4Q8NAM6 433 aaPredicted RBP15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 OR10AD1Q8NGE0 317 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 MEGF10Q96KG7 1140 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 VAPAQ9P0L0 249 aa15.78■□□□□ 0.12
HMGCS1-206ENST00000511774 TRBV5-3A0A0A0MS03 114 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 C5orf63A6NC05 138 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 ABHD16AO95870 558 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 HIST1H2ABP04908 130 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 CST2P09228 141 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 ARHGDIAP52565 204 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 HIST3H2AQ7L7L0 130 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 KIRREL3Q8IZU9 778 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 OR8B3Q8NGG8 313 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 PFN4Q8NHR9 129 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 HIST1H2ACQ93077 130 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 HAVCR1Q96D42 359 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 OR8B2Q96RD0 313 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 SMURF2Q9HAU4 748 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 INIPQ9NRY2 104 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 TIMM10BQ9Y5J6 103 aa15.77■□□□□ 0.12
HMGCS1-206ENST00000511774 CSF1P09603 554 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 GSTM3P21266 225 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 CPT2P23786 658 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 IER3P46695 156 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 BPIFB3P59826 476 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 CD47Q08722 323 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 PAGE3Q5JUK9 113 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 FOXL2NBQ6ZUU3 175 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 FUNDC1Q8IVP5 155 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 C19orf18Q8NEA5 215 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 VANGL1Q8TAA9 524 aaPredicted RBP15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 PLEKHA8Q96JA3 519 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 TMEM38AQ9H6F2 299 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 TBCCD1Q9NVR7 557 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 ANGPT4Q9Y264 503 aa15.76■□□□□ 0.11
HMGCS1-206ENST00000511774 DNAH9Q9NYC9 4486 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 A0A0U1RQK1 487 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 TRPC5OSA6NMA1 111 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 SURF4O15260 269 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 SNNO75324 88 aaPredicted RBP15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 TSPAN19P0C672 248 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 SLC6A2P23975 617 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 MOGAT3Q86VF5 341 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 PTOV1Q86YD1 416 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 ALDH16A1Q8IZ83 802 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 SLC7A6Q92536 515 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 C16orf95Q9H693 158 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 C20orf141Q9NUB4 165 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 ACOXLQ9NUZ1 547 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 CLN8Q9UBY8 286 aa15.75■□□□□ 0.11
HMGCS1-206ENST00000511774 TRAPPC13A5PLN9 417 aa15.74■□□□□ 0.11
HMGCS1-206ENST00000511774 UBDO15205 165 aa15.74■□□□□ 0.11
HMGCS1-206ENST00000511774 MLNRO43193 412 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms