RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TBC1D3DA0A087WVF3 549 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D3EA0A087X179 549 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 VWC2LB2RUY7 222 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D3LB9A6J9 549 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 F5H5T6 163 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 M0QZ24 198 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 UBFD1O14562 309 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PPP1R2P9O14990 202 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 LDB2O43679 373 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 GNG7O60262 68 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SERPINA7P05543 415 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 UCHL1P09936 223 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CD37P11049 281 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TDGF1P13385 188 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 GPX2P18283 190 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RCC1P18754 421 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 KLRC2P26717 231 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 HTR2CP28335 458 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 APLNRP35414 380 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MVDP53602 400 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CLRN1P58418 232 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 HBA1P69905 142 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PRKCDQ05655 676 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 BAXQ07812 192 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 FUT7Q11130 342 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZP4Q12836 540 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TPBGQ13641 420 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 GK3PQ14409 553 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 BEAN1Q3B7T3 259 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 UTF1Q5T230 341 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 HENMT1Q5T8I9 393 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 PRAMEF17Q5VTA0 474 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 FAM69BQ5VUD6 431 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2A2Q6IF42 318 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D3CQ6IPX1 549 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF613Q6PF04 617 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 WDR59Q6PJI9 974 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CASP12Q6UXS9 341 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 B3GLCTQ6Y288 498 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 DET1Q7L5Y6 550 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NUFIP2Q7Z417 695 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MFSD6LQ8IWD5 586 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 KLHDC8AQ8IYD2 350 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D3Q8IZP1 549 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF444Q8N0Y2 327 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM123Q8N131 208 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MS4A15Q8N5U1 240 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF738Q8NE65 137 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR4D9Q8NGE8 314 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR9Q2Q8NGE9 314 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR4D5Q8NGN0 318 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR1L4Q8NGR5 311 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 OR52E5Q8NH55 327 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 THAP6Q8TBB0 222 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 LGALS14Q8TCE9 139 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CASTOR1Q8WTX7 329 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NAT6Q93015 286 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC25A28Q96A46 364 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MOAP1Q96BY2 351 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 COQ8BQ96D53 544 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 WDR34Q96EX3 536 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MRAP2Q96G30 205 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 P2RY11Q96G91 374 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ADGRG7Q96K78 797 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TP53RKQ96S44 253 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 DPCDQ9BVM2 203 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 RNF26Q9BY78 433 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NAA50Q9GZZ1 169 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 DPAGT1Q9H3H5 408 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 SRMSQ9H3Y6 488 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 HACL1Q9UJ83 578 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF346Q9UL40 294 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 TROQ12816 1431 aaPredicted RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MYOM2P54296 1465 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 ERVK-7P63135 1459 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 NEO1Q92859 1461 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 CLTCL1P53675 1640 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MYH6P13533 1939 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 AKAP11Q9UKA4 1901 aa2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 KDM5AP29375 1690 aaKnown RBP2.77□□□□□ -1.97
SNRNP48-202ENST00000496946 MEIKINA0A087WXM9 373 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D3IA0A087WXS9 549 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 A0A1B0GTI1 187 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PSMB11A5LHX3 300 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TRAPPC13A5PLN9 417 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PRSS29PA6NIE9 313 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 AQP7P3A6NL99 342 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 B5MCH6 92 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PPP5D1E7EU14 171 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LATO43561 262 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CTSVO60911 334 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC25A12O75746 678 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM50AO95807 157 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ALDOCP09972 364 aaKnown RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ANKRD34CP0C6C1 535 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D3HP0C7X1 549 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LIPCP11150 499 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TAC1P20366 129 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 KITLGP21583 273 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 KDELR1P24390 212 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms