RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 GIPC3Q8TF64 312 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 DNAJC9Q8WXX5 260 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 NABP1Q96AH0 204 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 MUCL1Q96DR8 90 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 CENPNQ96H22 339 aaPredicted RBP5.85□□□□□ -1.47
VPS52-219ENST00000493379 RAX2Q96IS3 184 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 RADILQ96JH8 1075 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 RBP7Q96R05 134 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 NIPSNAP1Q9BPW8 284 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 BDH2Q9BUT1 245 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 KATNB1Q9BVA0 655 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 ULBP2Q9BZM5 246 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 NDEL1Q9GZM8 345 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 SIAEQ9HAT2 523 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 NGBQ9NPG2 151 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 B3GAT2Q9NPZ5 323 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 TMEM38BQ9NVV0 291 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 NPAP1Q9NZP6 1156 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 BAIAP2Q9UQB8 552 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 SAMHD1Q9Y3Z3 626 aaKnown RBP5.85□□□□□ -1.47
VPS52-219ENST00000493379 CDH10Q9Y6N8 788 aa5.85□□□□□ -1.47
VPS52-219ENST00000493379 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 ZNF503-AS2A6NEH8 195 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 FAM171A2A8MVW0 826 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 SHISA9B4DS77 424 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 H7C1Q1 480 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 M0R3G1 203 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 RAD51DO75771 328 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 KRT33AO76009 404 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 MMP7P09237 267 aaPredicted RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 OR8G3PP0DMU2 310 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 ZNF35P13682 527 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 FASP25445 335 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 SLC6A6P31641 620 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 ARR3P36575 388 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 ACVR1BP36896 505 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 PTDSS1P48651 473 aaKnown RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 LSM6P62312 80 aaKnown RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 ERVK-25P63136 954 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 PPP1R8Q12972 351 aaKnown RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 MELKQ14680 651 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 CR1LQ2VPA4 569 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 MESTQ5EB52 335 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 KDM4DQ6B0I6 523 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 KLHL17Q6TDP4 642 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 PTCHD4Q6ZW05 846 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 MEX3DQ86XN8 651 aaKnown RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 CDC20BQ86Y33 519 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 HIPK1Q86Z02 1210 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 SVOPLQ8N434 492 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 SLC22A24Q8N4F4 322 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 AQP11Q8NBQ7 271 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 NPEPL1Q8NDH3 523 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 NOXO1Q8NFA2 376 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 OR10G2Q8NGC3 310 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 OR9Q2Q8NGE9 314 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 OR8D4Q8NGM9 314 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 OR6N1Q8NGY5 312 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 MBD6Q96DN6 1003 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 KIRREL1Q96J84 757 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 Q96M85 177 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 ALKBH3Q96Q83 286 aaPredicted RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 RAB3IPQ96QF0 476 aaPredicted RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 POLDIP3Q9BY77 421 aaKnown RBP5.84□□□□□ -1.47
VPS52-219ENST00000493379 NMNAT2Q9BZQ4 307 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 GABARAPL1Q9H0R8 117 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 GRHPRQ9UBQ7 328 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 ADAM18Q9Y3Q7 739 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 IER3IP1Q9Y5U9 82 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 U3KQV3 271 aa5.84□□□□□ -1.47
VPS52-219ENST00000493379 CADP27708 2225 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 TEX13CA0A0J9YWL9 993 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 ARHGEF9O43307 516 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 TIPRLO75663 272 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 CIB2O75838 187 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 SERPINA5P05154 406 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 DANCRP0C864 163 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 HIST1H1CP16403 213 aaKnown RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 ZNF14P17017 642 aaPredicted RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 PRKACGP22612 351 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 CRABP1P29762 137 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 RPL4P36578 427 aaKnown RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 DAPP51397 102 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 ARHGDIAP52565 204 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 CLRN1P58418 232 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 ESRRGP62508 458 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 HIST1H3AP68431 136 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 KRR1Q13601 381 aaKnown RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 KPNB1Q14974 876 aaKnown RBP5.83□□□□□ -1.48
VPS52-219ENST00000493379 ZSCAN26Q16670 478 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 PCK2Q16822 640 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 HIKESHIQ53FT3 197 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 HIST2H3PS2Q5TEC6 136 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 CARD17Q5XLA6 110 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 TMEM108Q6UXF1 575 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 HIST2H3AQ71DI3 136 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 IGFN1Q86VF2 1251 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 SKA3Q8IX90 412 aa5.83□□□□□ -1.48
VPS52-219ENST00000493379 HS3ST5Q8IZT8 346 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms