RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 FAM86C1Q9NVL1 165 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 EXTL2Q9UBQ6 330 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 TBC1D24Q9ULP9 559 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SPATA2Q9UM82 520 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 IGHV3-15A0A0B4J1V0 119 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 A0A1W2PQ09 198 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 IFITM5A6NNB3 132 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.42
PTPN7-216ENST00000492977 WNT11O96014 354 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 PAHP00439 452 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 HPNP05981 417 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 EIF4EP06730 217 aaKnown RBP12.46□□□□□ -0.42
PTPN7-216ENST00000492977 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.42
PTPN7-216ENST00000492977 MFGE8Q08431 387 aaPredicted RBP12.46□□□□□ -0.42
PTPN7-216ENST00000492977 MFAP5Q13361 173 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 C10orf128Q5T292 105 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 PDSS1Q5T2R2 415 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 CORO6Q6QEF8 472 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.42
PTPN7-216ENST00000492977 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 TMEM123Q8N131 208 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 Q8N402 240 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 GALNT16Q8N428 558 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 OR2AJ1Q8NGZ0 328 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 TMEM106AQ96A25 262 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 SLAMF6Q96DU3 332 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 ADGRG7Q96K78 797 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 GFI1Q99684 422 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 KCNJ15Q99712 375 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 BRD7Q9NPI1 651 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 CENPMQ9NSP4 180 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 PLA2G3Q9NZ20 509 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 GTF2A1LQ9UNN4 478 aa12.46□□□□□ -0.42
PTPN7-216ENST00000492977 TMEM269A0A1B0GVZ9 245 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 HLA-DQB1P01920 261 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ISG15P05161 165 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 LIPCP11150 499 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ASAH1Q13510 395 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 P2RY14Q15391 338 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 TGIF1Q15583 401 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 AGAP7PQ5VUJ5 663 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 GDPD3Q7L5L3 318 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 LRRTM1Q86UE6 522 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ZNF433Q8N7K0 673 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ZIC4Q8N9L1 334 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 OR51A4Q8NGJ6 313 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 OR10AC1Q8NH08 325 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ORAI1Q96D31 301 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 AGAP4Q96P64 663 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ZNF385AQ96PM9 386 aaKnown RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 SLC25A18Q9H1K4 315 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 ZNF703Q9H7S9 590 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 NIPAL2Q9H841 368 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 G6PC2Q9NQR9 355 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 OR52A1Q9UKL2 312 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 POLR1DQ9Y2S0 133 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 KLF13Q9Y2Y9 288 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-216ENST00000492977 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 LHFPL6Q9Y693 200 aa12.45□□□□□ -0.42
PTPN7-216ENST00000492977 H0YC42 278 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 SP1P08047 785 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 CEACAM1P13688 526 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 SNRPBP14678 240 aaKnown RBP12.44□□□□□ -0.42
PTPN7-216ENST00000492977 CDAP32320 146 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 PITPNBP48739 271 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 STARP49675 285 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 TMEM244Q5VVB8 128 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 SLC25A25Q6KCM7 469 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 FOXL2NBQ6ZUU3 175 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 MDS2Q8NDY4 140 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 OR4M1Q8NGD0 313 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 OR5H6Q8NGV6 325 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 OR10D3Q8NH80 312 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 HTRA1Q92743 480 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-216ENST00000492977 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
PTPN7-216ENST00000492977 EMC7Q9NPA0 242 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-216ENST00000492977 MALT1Q9UDY8 824 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 FOXD3Q9UJU5 478 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-216ENST00000492977 FBXL3Q9UKT7 428 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 RABL2BQ9UNT1 228 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 MED13Q9UHV7 2174 aa12.44□□□□□ -0.42
PTPN7-216ENST00000492977 CNTRLQ7Z7A1 2325 aa12.43□□□□□ -0.42
PTPN7-216ENST00000492977 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
PTPN7-216ENST00000492977 ZNF878C9JN71 531 aa12.43□□□□□ -0.42
PTPN7-216ENST00000492977 KLRC4-KLRK1H3BQV0 150 aa12.43□□□□□ -0.42
PTPN7-216ENST00000492977 CXCL13O43927 109 aa12.43□□□□□ -0.42
PTPN7-216ENST00000492977 NME2P1O60361 137 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms