RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF771Q7L3S4 317 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-206ENST00000489142 CXXC5Q7LFL8 322 aaKnown RBP11.95□□□□□ -0.5
VTI1A-206ENST00000489142 ZER1Q7Z7L7 766 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 ALDH16A1Q8IZ83 802 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 CLDND2Q8NHS1 167 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 KLF14Q8TD94 323 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-206ENST00000489142 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 C4orf45Q96LM5 186 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 GPX7Q96SL4 187 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-206ENST00000489142 NUAK2Q9H093 628 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 LPAR2Q9HBW0 351 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 KRCC1Q9NPI7 259 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-206ENST00000489142 GPR160Q9UJ42 338 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 DNHD1Q96M86 4753 aa11.95□□□□□ -0.5
VTI1A-206ENST00000489142 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 ZSCAN5BA6NJL1 495 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 DCTN6O00399 190 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 SGCEO43556 437 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 OR10H3O60404 316 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 KHDRBS3O75525 346 aaKnown RBP11.94□□□□□ -0.5
VTI1A-206ENST00000489142 ABHD16AO95870 558 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 IFNA2P01563 188 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 IGHV1-46P01743 117 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 SRD5A1P18405 259 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 ZNF81P51508 661 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 RPS6KA3P51812 740 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 MVKQ03426 396 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 SPRNQ5BIV9 151 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 GPR139Q6DWJ6 353 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 C1orf94Q6P1W5 598 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 USP51Q70EK9 711 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-206ENST00000489142 ZDHHC21Q8IVQ6 265 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 FITM2Q8N6M3 262 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 LINC01356Q8N9X3 169 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 HPS1Q92902 700 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 SAMD8Q96LT4 415 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 ERMAPQ96PL5 475 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-206ENST00000489142 CCT8L2Q96SF2 557 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 OR52D1Q9H346 318 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 FN3KQ9H479 309 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 DECR2Q9NUI1 292 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-206ENST00000489142 ASH2LQ9UBL3 628 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 LPAR3Q9UBY5 353 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 COL6A5A8TX70 2615 aa11.94□□□□□ -0.5
VTI1A-206ENST00000489142 IGHV1-69-2A0A0G2JMI3 117 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 RNF212BA8MTL3 300 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 B2RBV5 119 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 FAM157AC9JC47 383 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 PHF1O43189 567 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-206ENST00000489142 MMP15P51511 669 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 CDH15P55291 814 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 SMIM11AP58511 58 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 SCRN3Q0VDG4 424 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 PCGF3Q3KNV8 242 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 MBNL2Q5VZF2 373 aaKnown RBP11.93□□□□□ -0.5
VTI1A-206ENST00000489142 LEG1Q6P5S2 330 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 SYT9Q86SS6 491 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 OR4K13Q8NH42 304 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 NMNAT3Q96T66 252 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 SAP30LQ9HAJ7 183 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 SRA1Q9HD15 236 aaKnown RBP11.93□□□□□ -0.5
VTI1A-206ENST00000489142 IL1RAPQ9NPH3 570 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 PLEK2Q9NYT0 353 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
VTI1A-206ENST00000489142 PLSCR5A0PG75 271 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 RER1O15258 196 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 AHCYL1O43865 530 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 MT-ND5P03915 603 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 DBHP09172 617 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 HIST1H1CP16403 213 aaKnown RBP11.92□□□□□ -0.5
VTI1A-206ENST00000489142 FPR3P25089 353 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 ERFP50548 548 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 MRPS11P82912 194 aaKnown RBP11.92□□□□□ -0.5
VTI1A-206ENST00000489142 PPP1R8Q12972 351 aaKnown RBP11.92□□□□□ -0.5
VTI1A-206ENST00000489142 AQP6Q13520 282 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 RFX4Q33E94 735 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 CCDC92Q53HC0 331 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-206ENST00000489142 CLEC12AQ5QGZ9 265 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 SLC35F1Q5T1Q4 408 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 CORO6Q6QEF8 472 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 RINLQ6ZS11 566 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 ADCK1Q86TW2 530 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 JAZF1Q86VZ6 243 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 SDR9C7Q8NEX9 313 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 OR9Q2Q8NGE9 314 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 EGLN3Q9H6Z9 239 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 ELOVL3Q9HB03 270 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
VTI1A-206ENST00000489142 NDE1Q9NXR1 346 aa11.92□□□□□ -0.5
VTI1A-206ENST00000489142 NDRG4Q9ULP0 352 aaKnown RBP11.92□□□□□ -0.5
VTI1A-206ENST00000489142 TMCC3Q9ULS5 477 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms