RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 GLB1L2Q8IW92 636 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 OR4K13Q8NH42 304 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 C4orf45Q96LM5 186 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 GPX7Q96SL4 187 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-204ENST00000486023 SOX7Q9BT81 388 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 DECR2Q9NUI1 292 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 PLEK2Q9NYT0 353 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 ACTR3BQ9P1U1 418 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 KCNS2Q9ULS6 477 aa15.1■□□□□ 0.01
COL6A1-204ENST00000486023 RTTNQ86VV8 2226 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 SGCEO43556 437 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 LILRA1O75019 489 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 ABHD16AO95870 558 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 MT-ND5P03915 603 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 CALB2P22676 271 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 GIFP27352 417 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 GPR6P46095 362 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-204ENST00000486023 ARHGDIAP52565 204 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 PPP1CBP62140 327 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 MEP1BQ16820 701 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 SPATS1Q496A3 300 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 CLEC12AQ5QGZ9 265 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 SLC35F1Q5T1Q4 408 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 FAM166AQ6J272 317 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 ARL9Q6T311 187 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 RFPL4BQ6ZWI9 263 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 ADCK1Q86TW2 530 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 IPCEF1Q8WWN9 437 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-204ENST00000486023 SLC7A6Q92536 515 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 YIPF5Q969M3 257 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 CCDC124Q96CT7 223 aaKnown RBP15.09■□□□□ 0.01
COL6A1-204ENST00000486023 CLPTM1LQ96KA5 538 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 NMNAT3Q96T66 252 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 SHARPINQ9H0F6 387 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 TREM2Q9NZC2 230 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 VSX1Q9NZR4 365 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-204ENST00000486023 ASH2LQ9UBL3 628 aa15.09■□□□□ 0.01
COL6A1-204ENST00000486023 NDRG4Q9ULP0 352 aaKnown RBP15.09■□□□□ 0.01
COL6A1-204ENST00000486023 IGLV3-9A0A075B6K5 115 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 PLSCR5A0PG75 271 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 RENP00797 406 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 T-ENOLP0DO92 83 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 FPR3P25089 353 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 ZNF81P51508 661 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 MS4A2Q01362 244 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 RIN1Q13671 783 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 PGBD2Q6P3X8 592 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 DNM1P34Q6PK57 102 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 SYT9Q86SS6 491 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 OR9Q2Q8NGE9 314 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 KLF14Q8TD94 323 aaPredicted RBP15.08■□□□□ 0
COL6A1-204ENST00000486023 MARS2Q96GW9 593 aaKnown RBP15.08■□□□□ 0
COL6A1-204ENST00000486023 LRGUKQ96M69 825 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 FN3KQ9H479 309 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 EGLN3Q9H6Z9 239 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 ELOVL3Q9HB03 270 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 ZNF275Q9NSD4 429 aaPredicted RBP15.08■□□□□ 0
COL6A1-204ENST00000486023 U3KQV3 271 aa15.08■□□□□ 0
COL6A1-204ENST00000486023 DCTN6O00399 190 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 RER1O15258 196 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 KRT36O76013 467 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 IGHV3-13P01766 116 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 HLA-DQA2P01906 255 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 HIST1H1CP16403 213 aaKnown RBP15.07■□□□□ 0
COL6A1-204ENST00000486023 ACHEP22303 614 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 CRABP1P29762 137 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 MVKQ03426 396 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 TSPAN31Q12999 210 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 TRIM25Q14258 630 aaKnown RBP15.07■□□□□ 0
COL6A1-204ENST00000486023 SDR9C7Q8NEX9 313 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 OR52E2Q8NGJ4 325 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 THTPAQ9BU02 230 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 RPRD1BQ9NQG5 326 aaKnown RBP15.07■□□□□ 0
COL6A1-204ENST00000486023 CDC42EP3Q9UKI2 254 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 B9D1Q9UPM9 204 aa15.07■□□□□ 0
COL6A1-204ENST00000486023 TCRBV5S2A0A599 114 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 TIMM8AO60220 97 aaPredicted RBP15.06■□□□□ 0
COL6A1-204ENST00000486023 CCNB2O95067 398 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 TXNDC12O95881 172 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 GASTP01350 101 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 DBHP09172 617 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 AQP6Q13520 282 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 PCGF3Q3KNV8 242 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 FAM98BQ52LJ0 330 aaKnown RBP15.06■□□□□ 0
COL6A1-204ENST00000486023 AVPI1Q5T686 147 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 CORO6Q6QEF8 472 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 ZNF771Q7L3S4 317 aaPredicted RBP15.06■□□□□ 0
COL6A1-204ENST00000486023 VASH1Q7L8A9 365 aaPredicted RBP15.06■□□□□ 0
COL6A1-204ENST00000486023 OR6V1Q8N148 313 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 ARHGAP24Q8N264 748 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 CDADC1Q9BWV3 514 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 POFUT1Q9H488 388 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 LPAR2Q9HBW0 351 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 MSL2Q9HCI7 577 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 LYVE1Q9Y5Y7 322 aa15.06■□□□□ 0
COL6A1-204ENST00000486023 WNT9BO14905 357 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 IFNA2P01563 188 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 IGHV1-46P01743 117 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 TACSTD2P09758 323 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 IGFBP5P24593 272 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms