RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 UBXN6Q9BZV1 441 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ARL6Q9H0F7 186 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 UBE2ZQ9H832 354 aaPredicted RBP3.51□□□□□ -1.85
VPS41-212ENST00000482217 NIPAL2Q9H841 368 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 UGT1A8Q9HAW9 530 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 C6orf50Q9HD87 102 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 AMBNQ9NP70 447 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 A4GALTQ9NPC4 353 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 CTPS2Q9NRF8 586 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 SLC38A7Q9NVC3 462 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 KLRF1Q9NZS2 232 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 SLC12A6Q9UHW9 1150 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 RAB26Q9ULW5 256 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 ALG5Q9Y673 324 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 USH1CQ9Y6N9 552 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 METP08581 1390 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 NID2Q14112 1375 aa3.51□□□□□ -1.85
VPS41-212ENST00000482217 TDRD15B5MCY1 1934 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 ZNF532Q9HCE3 1301 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 SNAPC4Q5SXM2 1469 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 UQCRHLA0A096LP55 91 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TGIF2-C20orf24A0A0A6YYL0 155 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 A0A1B0GU03 582 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 A0A1B0GVG6 124 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TINCRA0A1B0GVN0 87 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TMEM150BA6NC51 233 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 GLTPD2A6NH11 291 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 ANHXE9PGG2 379 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 M0QZK8 103 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 HSD17B6O14756 317 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 NDUFS7O75251 213 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 RFPL2O75678 378 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TRAPPC6AO75865 159 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 OR7A10O76100 309 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 CATP04040 527 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 TYMSP04818 313 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 SERPINB2P05120 415 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PCCAP05165 728 aaPredicted RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 UQCRHP07919 91 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 OR8U9P0C7N5 309 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 SNHG28P0DPA3 235 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 GFAPP14136 432 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PSMA1P25786 263 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 TNFSF9P41273 254 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 OR3A2P47893 321 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PGFP49763 221 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 RPS6P62753 249 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 RPL31P62899 125 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 RPL32P62910 135 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 PAFAH1B2P68402 229 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 RGS1Q08116 209 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PRPSAP1Q14558 356 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 ABRAXAS2Q15018 415 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PTGES3Q15185 160 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 ZIC1Q15915 447 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 DUSP7Q16829 419 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PGGHGQ32M88 737 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TIGITQ495A1 244 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PLPP4Q5VZY2 271 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TMEM42Q69YG0 159 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 KCTD18Q6PI47 426 aaPredicted RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 TMEM179Q6ZVK1 233 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TMED4Q7Z7H5 227 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 FBXL14Q8N1E6 418 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 CLIP4Q8N3C7 705 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 GBGT1Q8N5D6 347 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 KIR3DL3Q8N743 410 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 ZSCAN4Q8NAM6 433 aaPredicted RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 OR9A2Q8NGT5 310 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 LHFPL5Q8TAF8 219 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 C11orf45Q8TAV5 145 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 SDR42E1Q8WUS8 393 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PIK3R3Q92569 461 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 ADTRPQ96IZ2 230 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 RILPQ96NA2 401 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TSC22D3Q99576 134 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 DOK1Q99704 481 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 NIPSNAP3BQ9BS92 247 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 DCTN5Q9BTE1 182 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TMEM208Q9BTX3 173 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 TRAF4Q9BUZ4 470 aaPredicted RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 ARMC7Q9H6L4 198 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 PELI2Q9HAT8 420 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 NMUR1Q9HB89 426 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 APOBEC3GQ9HC16 384 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 POLD4Q9HCU8 107 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 NRN1Q9NPD7 142 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 B3GAT2Q9NPZ5 323 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 DUS2Q9NX74 493 aaKnown RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 BFARQ9NZS9 450 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 ZNF107Q9UII5 783 aaPredicted RBP3.5□□□□□ -1.85
VPS41-212ENST00000482217 ZNF391Q9UJN7 358 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 SCML2Q9UQR0 700 aa3.5□□□□□ -1.85
VPS41-212ENST00000482217 ZBED9Q6R2W3 1325 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 A0A1W2PR80 420 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 hDV102S1A0JD36 115 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 RFPL4AA6NLU0 287 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 EFCAB7A8K855 629 aa3.49□□□□□ -1.85
VPS41-212ENST00000482217 C2CD4DB7Z1M9 353 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms