RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZNF524Q96C55 264 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF845Q96IR2 970 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ST6GAL2Q96JF0 529 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RADILQ96JH8 1075 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 ADGRG7Q96K78 797 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 C7orf34Q96L11 122 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 WFDC6Q9BQY6 131 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 TTYH2Q9BSA4 534 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RSPO3Q9BXY4 272 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 FKRPQ9H9S5 495 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 NMNAT1Q9HAN9 279 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 FANCFQ9NPI8 374 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 NANSQ9NR45 359 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SMPD3Q9NY59 655 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RHCGQ9UBD6 479 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 CLCF1Q9UBD9 225 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 RASD1Q9Y272 281 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 HSPE1-MOB4S4R3N1 261 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SVILO95425 2214 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 NBEAQ8NFP9 2946 aa5.49□□□□□ -1.53
SF3B1-209ENST00000479532 SPTA1P02549 2419 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 IGSF10Q6WRI0 2623 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ATRXP46100 2492 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 MPDZO75970 2070 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 IGHV3-15A0A0B4J1V0 119 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF98A6NK75 572 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 AQP7P3A6NL99 342 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 C12orf71A8MTZ7 269 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 EFCAB9A8MZ26 197 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 M0R3G1 203 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 DLGAP1O14490 977 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GPR171O14626 319 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 OR10H3O60404 316 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CYTIPO60759 359 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 TSC22D2O75157 780 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 NPIPB7O75200 414 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 DIRAS1O95057 198 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CCNB2O95067 398 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 RCBTB2O95199 551 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CH25HO95992 272 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 LDLRP01130 860 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 C1QBP02746 253 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 IFI30P13284 250 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CBLP22681 906 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 NR4A1P22736 598 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 FASP25445 335 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CHRNB4P30926 498 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 OPRM1P35372 400 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 HTR2BP41595 481 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GZMKP49863 264 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ERFP50548 548 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GBX2P52951 348 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ADARB1P78563 741 aaKnown RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 EGR4Q05215 589 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 RASGEF1BQ0VAM2 473 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GPR50Q13585 617 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 C1DQ13901 141 aaKnown RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF74Q16587 644 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 TEX30Q5JUR7 227 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 UBE2UQ5VVX9 321 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 TTC23Q5W5X9 447 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 PODNL1Q6PEZ8 512 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 C3P1Q6ZMU1 363 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ADGRE4PQ86SQ3 457 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GPAT4Q86UL3 456 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CNEP1R1Q8N9A8 125 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 POC5Q8NA72 575 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ADPRHL1Q8NDY3 354 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF680Q8NEM1 530 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 OR5J2Q8NH18 312 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 OR52J3Q8NH60 311 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 PFN4Q8NHR9 129 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 FNDC9Q8TBE3 224 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 RNF128Q8TEB7 428 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ROBO4Q8WZ75 1007 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 TAAR8Q969N4 342 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 BPIFA2Q96DR5 249 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 KTI12Q96EK9 354 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 DNAJA3Q96EY1 480 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GMPPAQ96IJ6 420 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 MOGAT1Q96PD6 335 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 PRSS27Q9BQR3 290 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF426Q9BUY5 554 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 SF3B5Q9BWJ5 86 aaKnown RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 SFXN3Q9BWM7 321 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 SRXN1Q9BYN0 137 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 PIGMQ9H3S5 423 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CCNB1IP1Q9NPC3 277 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 CHST11Q9NPF2 352 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 EXTL2Q9UBQ6 330 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 DNAJB9Q9UBS3 223 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 ERRFI1Q9UJM3 462 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 B3GALT5Q9Y2C3 310 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 KCNK7Q9Y2U2 307 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 SAMHD1Q9Y3Z3 626 aaKnown RBP5.48□□□□□ -1.53
SF3B1-209ENST00000479532 FAM215AQ9Y5M1 114 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 PEX16Q9Y5Y5 336 aa5.48□□□□□ -1.53
SF3B1-209ENST00000479532 FKBP7Q9Y680 259 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms