RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DPPA2Q7Z7J5 298 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 OR10AD1Q8NGE0 317 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 VANGL1Q8TAA9 524 aaPredicted RBP8.11□□□□□ -1.11
COL4A5-204ENST00000477429 UBE2FQ969M7 185 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 CMBLQ96DG6 245 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 OR2V2Q96R30 315 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 TBX15Q96SF7 602 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 LRMDAQ9H2I8 198 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 RAD21L1Q9H4I0 556 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 CACYBPQ9HB71 228 aaKnown RBP8.11□□□□□ -1.11
COL4A5-204ENST00000477429 CCNB1IP1Q9NPC3 277 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 SLCO1B3Q9NPD5 702 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 NANSQ9NR45 359 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 C20orf141Q9NUB4 165 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 THUMPD1Q9NXG2 353 aaKnown RBP8.11□□□□□ -1.11
COL4A5-204ENST00000477429 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 SLC7A7Q9UM01 511 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 PPP1R3CQ9UQK1 317 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 LRCH1Q9Y2L9 728 aa8.11□□□□□ -1.11
COL4A5-204ENST00000477429 CENPVL3A0A0U1RRI6 287 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 A0A1B0GUS0 222 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 TMEM247A6NEH6 219 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 TIMM23O14925 209 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 HDAC3O15379 428 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 GPR137BO60478 399 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 TSPAN19P0C672 248 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 MMP9P14780 707 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 CD247P20963 164 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 KITLGP21583 273 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ZNF84P51523 738 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 PCBP3P57721 371 aaKnown RBP8.1□□□□□ -1.11
COL4A5-204ENST00000477429 NCALDP61601 193 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 IFFO1Q0D2I5 559 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 FADDQ13158 208 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 SELPLGQ14242 412 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 HLXQ14774 488 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-204ENST00000477429 LRIF1Q5T3J3 769 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 KPRPQ5T749 579 aaPredicted RBP8.1□□□□□ -1.11
COL4A5-204ENST00000477429 FAM27BQ5VT28 67 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 SLC27A4Q6P1M0 643 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ZNF613Q6PF04 617 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 LRRN1Q6UXK5 716 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 Q6ZSV7 163 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ARMC8Q8IUR7 673 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 NKAIN4Q8IVV8 208 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 OR5AS1Q8N127 324 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ADAMTS16Q8TE57 1224 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
COL4A5-204ENST00000477429 CYSLTR2Q9NS75 346 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 SELENONQ9NZV5 590 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ASH2LQ9UBL3 628 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 EIF3KQ9UBQ5 218 aaKnown RBP8.1□□□□□ -1.11
COL4A5-204ENST00000477429 CTSZQ9UBR2 303 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ZNF229Q9UJW7 825 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 ANGPT4Q9Y264 503 aa8.1□□□□□ -1.11
COL4A5-204ENST00000477429 A0A0U1RQK1 487 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TNFRSF13BO14836 293 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 MLNRO43193 412 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 PIP5K1CO60331 668 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 CRYBA1P05813 215 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 UMPSP11172 480 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 RPS2P15880 293 aaKnown RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TNFRSF1BP20333 461 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 GNB2P62879 340 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 PRB3Q04118 309 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 DBPQ10586 325 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TAF11Q15544 211 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TNFAIP8L3Q5GJ75 292 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 WDR25Q64LD2 544 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 BTNL3Q6UXE8 466 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 ZNF620Q6ZNG0 422 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 NANOGNBQ7Z5D8 188 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 IGFN1Q86VF2 1251 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 C1orf174Q8IYL3 243 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 MUC20Q8N307 709 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 AENQ8WTP8 325 aaKnown RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TMEM255BQ8WV15 326 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 ANP32BQ92688 251 aaKnown RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 PCGF1Q9BSM1 259 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TMEM109Q9BVC6 243 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 ROPN1BQ9BZX4 212 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 SEMA6AQ9H2E6 1030 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 RMND5AQ9H871 391 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 ZFAND3Q9H8U3 227 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 ROPN1Q9HAT0 212 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-204ENST00000477429 TCF7L1Q9HCS4 588 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 EMC7Q9NPA0 242 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 IL19Q9UHD0 177 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 IL20RAQ9UHF4 553 aa8.09□□□□□ -1.11
COL4A5-204ENST00000477429 MCIDASD6RGH6 385 aa8.08□□□□□ -1.12
COL4A5-204ENST00000477429 F5H5P2 479 aa8.08□□□□□ -1.12
COL4A5-204ENST00000477429 H7C1C5 153 aa8.08□□□□□ -1.12
COL4A5-204ENST00000477429 M0QX08 132 aa8.08□□□□□ -1.12
COL4A5-204ENST00000477429 IMPA2O14732 288 aa8.08□□□□□ -1.12
COL4A5-204ENST00000477429 UBDO15205 165 aa8.08□□□□□ -1.12
COL4A5-204ENST00000477429 FMO6PO60774 539 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms