RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 E9PBE3 544 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 RIPK2O43353 540 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 RNF13O43567 381 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
SMG5-204ENST00000476954 IGHG1P01857 330 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 LIPFP07098 398 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 NUDT7P0C024 238 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 GSTM3P21266 225 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 HOXD3P31249 432 aaPredicted RBP12.57□□□□□ -0.4
SMG5-204ENST00000476954 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
SMG5-204ENST00000476954 FMODQ06828 376 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 LY6EQ16553 131 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 PDCD4Q53EL6 469 aaKnown RBP12.57□□□□□ -0.4
SMG5-204ENST00000476954 VMO1Q7Z5L0 202 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 NUDCD3Q8IVD9 361 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 PNKDQ8N490 385 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 TRIML2Q8N7C3 387 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 NOXO1Q8NFA2 376 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 OR2T6Q8NHC8 308 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 SLC35B4Q969S0 331 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 WFDC6Q9BQY6 131 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 MRPL13Q9BYD1 178 aaKnown RBP12.57□□□□□ -0.4
SMG5-204ENST00000476954 MMADHCQ9H3L0 296 aaPredicted RBP12.57□□□□□ -0.4
SMG5-204ENST00000476954 MEAF6Q9HAF1 191 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 STARD10Q9Y365 291 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
SMG5-204ENST00000476954 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 A0A1B0GX12 115 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 F5H5P2 479 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 MLNRO43193 412 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 TPST1O60507 370 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 TPST2O60704 377 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 ABHD16AO95870 558 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 C10orf128Q5T292 105 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 CD276Q5ZPR3 534 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 FAM91A1Q658Y4 838 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 ZNF572Q7Z3I7 529 aaPredicted RBP12.56□□□□□ -0.4
SMG5-204ENST00000476954 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 PNLDC1Q8NA58 520 aaKnown RBP12.56□□□□□ -0.4
SMG5-204ENST00000476954 OR4C13Q8NGP0 309 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 NSMAFQ92636 917 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 HAVCR1Q96D42 359 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 MAGEB18Q96M61 343 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 CACYBPQ9HB71 228 aaKnown RBP12.56□□□□□ -0.4
SMG5-204ENST00000476954 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
SMG5-204ENST00000476954 OR10H3O60404 316 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 TRMUO75648 421 aaKnown RBP12.55□□□□□ -0.4
SMG5-204ENST00000476954 FSTL3O95633 263 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 KRT75O95678 551 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 CH25HO95992 272 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 LAP3P28838 519 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 IL12AP29459 219 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 CDH12P55289 794 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 UFM1P61960 85 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 HABP2Q14520 560 aaPredicted RBP12.55□□□□□ -0.4
SMG5-204ENST00000476954 OR1Q1Q15612 314 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 GTDC1Q4AE62 458 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 DMRTC1Q5HYR2 192 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 RANBP3LQ86VV4 465 aaPredicted RBP12.55□□□□□ -0.4
SMG5-204ENST00000476954 HOMEZQ8IX15 550 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 MAL2Q969L2 176 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 SEPHS2Q99611 448 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
SMG5-204ENST00000476954 LYSTQ99698 3801 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 LRRC30A6NM36 301 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 H3BUX3 64 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 MT-ATP6P00846 226 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 SRP9P49458 86 aaKnown RBP12.54□□□□□ -0.4
SMG5-204ENST00000476954 NPY4RP50391 375 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 ZNF133P52736 654 aaPredicted RBP12.54□□□□□ -0.4
SMG5-204ENST00000476954 KLRD1Q13241 179 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 ZNF181Q2M3W8 571 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 DPY19L1Q2PZI1 675 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 OR2T2Q6IF00 324 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 ARL9Q6T311 187 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 NPEPL1Q8NDH3 523 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 VPS33AQ96AX1 596 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 NMD3Q96D46 503 aaKnown RBP12.54□□□□□ -0.4
SMG5-204ENST00000476954 CLPTM1LQ96KA5 538 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 OR52E6Q96RD3 313 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 TMEM43Q9BTV4 400 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 CENPHQ9H3R5 247 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 SELENONQ9NZV5 590 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 ERVK-18Q9QC07 812 aa12.54□□□□□ -0.4
SMG5-204ENST00000476954 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 ADAM20O43506 726 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 F13BP05160 661 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 KRT4P19013 534 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 CLNS1AP54105 237 aaKnown RBP12.53□□□□□ -0.4
SMG5-204ENST00000476954 ZNF74Q16587 644 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 FAM27BQ5VT28 67 aa12.53□□□□□ -0.4
SMG5-204ENST00000476954 SFRP4Q6FHJ7 346 aaPredicted RBP12.53□□□□□ -0.4
SMG5-204ENST00000476954 C1orf94Q6P1W5 598 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms