RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 LRRC28Q86X40 367 aaPredicted RBP9.13□□□□□ -0.95
CDRT1-205ENST00000475944 CALHM3Q86XJ0 350 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 CLDN22Q8N7P3 220 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 OR2Z1Q8NG97 314 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 OR8J3Q8NGG0 315 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 SLC25A28Q96A46 364 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 BPIFA2Q96DR5 249 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 THOC1Q96FV9 657 aaKnown RBP9.13□□□□□ -0.95
CDRT1-205ENST00000475944 ATP6V1G3Q96LB4 118 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 COG8Q96MW5 612 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 DUX5Q96PT3 197 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 MS4A7Q9GZW8 240 aaPredicted RBP9.13□□□□□ -0.95
CDRT1-205ENST00000475944 UNKLQ9H9P5 680 aaKnown RBP9.13□□□□□ -0.95
CDRT1-205ENST00000475944 INTS9Q9NV88 658 aaKnown RBP9.13□□□□□ -0.95
CDRT1-205ENST00000475944 TBCCD1Q9NVR7 557 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 OR5V1Q9UGF6 321 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 IL19Q9UHD0 177 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 PPP1R3CQ9UQK1 317 aa9.13□□□□□ -0.95
CDRT1-205ENST00000475944 POM121CA8CG34 1229 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 F5H0A9 414 aaPredicted RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 IFNL4K9M1U5 179 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 DOK2O60496 412 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 RNASE1P07998 156 aaKnown RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 KITLGP21583 273 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 CPT2P23786 658 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 MDH2P40926 338 aaKnown RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 HTR5AP47898 357 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 MTNR1AP48039 350 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 SEC61A1P61619 476 aaKnown RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 SCRN3Q0VDG4 424 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 ANKDD1AQ495B1 522 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 KLF17Q5JT82 389 aaPredicted RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 METTL21CQ5VZV1 264 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 IGFN1Q86VF2 1251 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 BCL6BQ8N143 479 aaPredicted RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 MUC20Q8N307 709 aaPredicted RBP9.12□□□□□ -0.95
CDRT1-205ENST00000475944 ITLN1Q8WWA0 313 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 PRRC1Q96M27 445 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 SIKE1Q9BRV8 207 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 POLE4Q9NR33 117 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 IL20RAQ9UHF4 553 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 LRCH1Q9Y2L9 728 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 WNK2Q9Y3S1 2297 aa9.12□□□□□ -0.95
CDRT1-205ENST00000475944 MEGF8Q7Z7M0 2845 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 CLDN34H7C241 214 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 FBP2O00757 339 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 SGCEO43556 437 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 NPPAP01160 153 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 GUCY1A3Q02108 690 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 HNRNPA0Q13151 305 aaKnown RBP9.11□□□□□ -0.95
CDRT1-205ENST00000475944 ZMYND11Q15326 602 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 LRRC23Q53EV4 343 aaPredicted RBP9.11□□□□□ -0.95
CDRT1-205ENST00000475944 CYBRD1Q53TN4 286 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 BTNL3Q6UXE8 466 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 Q6ZR03 302 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 OAFQ86UD1 273 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 PARP8Q8N3A8 854 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 LRRC75AQ8NAA5 344 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 OR52E2Q8NGJ4 325 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 HAVCR1Q96D42 359 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 CMBLQ96DG6 245 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 TPD52L3Q96J77 140 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 MAGEB18Q96M61 343 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 C1orf147Q96MC9 270 aaPredicted RBP9.11□□□□□ -0.95
CDRT1-205ENST00000475944 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
CDRT1-205ENST00000475944 OR2V2Q96R30 315 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 SIGLEC11Q96RL6 698 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 SSBP3Q9BWW4 388 aaPredicted RBP9.11□□□□□ -0.95
CDRT1-205ENST00000475944 C1QTNF5Q9BXJ0 243 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 MRGBPQ9NV56 204 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 A4GNTQ9UNA3 340 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 ARHGAP32A7KAX9 2087 aa9.11□□□□□ -0.95
CDRT1-205ENST00000475944 TRAV27A0A087WT01 109 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 A0A0G2JND7 137 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 CEACAM18A8MTB9 384 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 EFCAB9A8MZ26 197 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 TMEM178BH3BS89 294 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 J3QW42 95 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 FXYD1O00168 92 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 XKRYO14609 159 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 AHCYL1O43865 530 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 KDELR2P33947 212 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 SLC9A3P48764 834 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 PAX8Q06710 450 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 AQP6Q13520 282 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 COQ5Q5HYK3 327 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 SLC27A4Q6P1M0 643 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 LEG1Q6P5S2 330 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 LRRN1Q6UXK5 716 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 VASH1Q7L8A9 365 aaPredicted RBP9.1□□□□□ -0.95
CDRT1-205ENST00000475944 NRMQ8IXM6 262 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 MICU2Q8IYU8 434 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 OR51A7Q8NH64 312 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 C10orf82Q8WW14 230 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 LZICQ8WZA0 190 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 PTP4A1Q93096 173 aa9.1□□□□□ -0.95
CDRT1-205ENST00000475944 NDEL1Q9GZM8 345 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms