RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NKAIN4Q8IVV8 208 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 C1orf174Q8IYL3 243 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 DPP10Q8N608 796 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 POU5F2Q8N7G0 328 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 CLDN22Q8N7P3 220 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 CMTM5Q96DZ9 223 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 PCDHAC1Q9H158 963 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 WNT5BQ9H1J7 359 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 SMURF2Q9HAU4 748 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ELOVL3Q9HB03 270 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 C20orf141Q9NUB4 165 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
CCDC78-209ENST00000474647 NDUFAF1Q9Y375 327 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 LOC100653049A0A140TA62 436 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 H3BSA7 217 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 FBP2O00757 339 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 KRT34O76011 436 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 ABHD16AO95870 558 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 IGHV4-38-2P0DP08 117 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 TNFRSF1AP19438 455 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 TNFRSF1BP20333 461 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 GSTM3P21266 225 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 OMGP23515 440 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 PCGF2P35227 344 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 GUCA1AP43080 201 aaPredicted RBP11.78□□□□□ -0.52
CCDC78-209ENST00000474647 SLC6A9P48067 706 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 PSG7Q13046 419 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 ZMYND11Q15326 602 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 SLC9A3R2Q15599 337 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 TMEM155Q4W5P6 130 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 INTS11Q5TA45 600 aaKnown RBP11.78□□□□□ -0.52
CCDC78-209ENST00000474647 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 ZER1Q7Z7L7 766 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 SLC30A8Q8IWU4 369 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 PARP8Q8N3A8 854 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 OR52E2Q8NGJ4 325 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 TMEM239Q8WW34 195 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 ITLN1Q8WWA0 313 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 RASSF5Q8WWW0 418 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 C4orf45Q96LM5 186 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 CGREF1Q99674 301 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 POFUT1Q9H488 388 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 KLHL21Q9UJP4 597 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 SH3GLB1Q9Y371 365 aa11.78□□□□□ -0.52
CCDC78-209ENST00000474647 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
CCDC78-209ENST00000474647 PRKDCP78527 4128 aaKnown RBP11.78□□□□□ -0.52
CCDC78-209ENST00000474647 NOTCH1P46531 2555 aa11.77□□□□□ -0.52
CCDC78-209ENST00000474647 TRAV40A0A0B4J280 105 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 MDFIC2A0A1B0GVS7 189 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 A8MXK9 166 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 MRASO14807 208 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 PIP5K1CO60331 668 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 CST2P09228 141 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 RBM34P42696 430 aaKnown RBP11.77□□□□□ -0.53
CCDC78-209ENST00000474647 PCBD1P61457 104 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 CDK5R2Q13319 367 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 NFYCQ13952 458 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 LAPTM4AQ15012 233 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 ALG10Q5BKT4 473 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 SLC25A47Q6Q0C1 308 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 ARL9Q6T311 187 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 IGFN1Q86VF2 1251 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 ZNF283Q8N7M2 679 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 OR10A6Q8NH74 314 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 RCN3Q96D15 328 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 NMD3Q96D46 503 aaKnown RBP11.77□□□□□ -0.53
CCDC78-209ENST00000474647 RBP7Q96R05 134 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 TXNIPQ9H3M7 391 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
CCDC78-209ENST00000474647 TIMM10BQ9Y5J6 103 aa11.77□□□□□ -0.53
CCDC78-209ENST00000474647 POM121CA8CG34 1229 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 F5H0A9 414 aaPredicted RBP11.76□□□□□ -0.53
CCDC78-209ENST00000474647 MDH2P40926 338 aaKnown RBP11.76□□□□□ -0.53
CCDC78-209ENST00000474647 MTNR1AP48039 350 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 BTNL3Q6UXE8 466 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 LRRC28Q86X40 367 aaPredicted RBP11.76□□□□□ -0.53
CCDC78-209ENST00000474647 PCYOX1LQ8NBM8 494 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 NPEPL1Q8NDH3 523 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 SAMD8Q96LT4 415 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 OR2V2Q96R30 315 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 ALG12Q9BV10 488 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
CCDC78-209ENST00000474647 KAT8Q9H7Z6 458 aaKnown RBP11.76□□□□□ -0.53
CCDC78-209ENST00000474647 TNFRSF19Q9NS68 423 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 NDRG4Q9ULP0 352 aaKnown RBP11.76□□□□□ -0.53
CCDC78-209ENST00000474647 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 MED31Q9Y3C7 131 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 WNK1Q9H4A3 2382 aa11.76□□□□□ -0.53
CCDC78-209ENST00000474647 CEACAM18A8MTB9 384 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 H7C1C5 153 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 CLDN34H7C241 214 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 FXYD1O00168 92 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 DOK2O60496 412 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 ICMTO60725 284 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms