RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LEG1Q6P5S2 330 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 PEG10Q86TG7 708 aaKnown RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 MEX3DQ86XN8 651 aaKnown RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 LDLRAD3Q86YD5 345 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 ZNF679Q8IYX0 411 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 PUSL1Q8N0Z8 303 aaKnown RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 ARHGEF39Q8N4T4 335 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 EXD3Q8N9H8 876 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 DTX3Q8N9I9 347 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 ZSCAN1Q8NBB4 408 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 OR52E1Q8NGJ3 308 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 CYB5D2Q8WUJ1 264 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 PPP1R1CQ8WVI7 109 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 NUDCD2Q8WVJ2 157 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 PCNPQ8WW12 178 aaKnown RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 LCN9Q8WX39 176 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 SMARCD2Q92925 531 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 FAM46BQ96A09 425 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 CTHRC1Q96CG8 243 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 MALSU1Q96EH3 234 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 ZC3H10Q96K80 434 aaKnown RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 SMIM8Q96KF7 97 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 AQP10Q96PS8 301 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 INSM2Q96T92 566 aaPredicted RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 S100A13Q99584 98 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 CDCA3Q99618 268 aaPredicted RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 GFI1Q99684 422 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 PBDC1Q9BVG4 233 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 MS4A7Q9GZW8 240 aaPredicted RBP7.26□□□□□ -1.25
CCDC93-208ENST00000474546 FKRPQ9H9S5 495 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 OBP2AQ9NY56 170 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 KCNG2Q9UJ96 466 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 IKZF2Q9UKS7 526 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 SLC17A4Q9Y2C5 497 aa7.26□□□□□ -1.25
CCDC93-208ENST00000474546 SETD2Q9BYW2 2564 aaPredicted RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TBC1D3DA0A087WVF3 549 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TMEM272A0A1B0GTI8 110 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 A0A1W2PPK0 400 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 LOC390937A0A1W2PQ73 354 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OR6C74A6NCV1 312 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 PRR19A6NJB7 356 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 CEACAM18A8MTB9 384 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 C2orf74A8MZ97 194 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TBC1D3LB9A6J9 549 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 K7ESM1 405 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 SULT2B1O00204 365 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 NUPL2O15504 423 aaKnown RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 LATO43561 262 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 GMFGO60234 142 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OR10H2O60403 315 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 F10P00742 488 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 CSTAP01040 98 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 IFNA17P01571 189 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 GSTP1P09211 210 aaKnown RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TBC1D3HP0C7X1 549 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 ZNF888P0CJ79 500 aaPredicted RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 POU3F2P20265 443 aaPredicted RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 ALOX5APP20292 161 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 CSRP1P21291 193 aaKnown RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 C5AR1P21730 350 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 MST1P26927 711 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 CRABP1P29762 137 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 GABRA3P34903 492 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 ACAA2P42765 397 aaKnown RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 GLP1RP43220 463 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 FNTBP49356 437 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 RIDAP52758 137 aaKnown RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 RAB38P57729 211 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 STARD6P59095 220 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 POLR2GP62487 172 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 BTG2P78543 158 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 CFHR1Q03591 330 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TEAD2Q15562 447 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 PRICKLE4Q2TBC4 344 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 C2orf76Q3KRA6 126 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TMEM128Q5BJH2 165 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 ALG10Q5BKT4 473 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 C1orf100Q5SVJ3 147 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 EEF1A1P5Q5VTE0 462 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 NKAIN2Q5VXU1 208 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TMEM215Q68D42 235 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TBC1D3CQ6IPX1 549 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 PRSS54Q6PEW0 395 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OPN5Q6U736 354 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TMEM184AQ6ZMB5 413 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 MDGA2Q7Z553 956 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TMED4Q7Z7H5 227 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 C1QL4Q86Z23 238 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 MISPQ8IVT2 679 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 TBC1D3Q8IZP1 549 aaPredicted RBP7.25□□□□□ -1.25
CCDC93-208ENST00000474546 AVL9Q8NBF6 648 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OR5AP2Q8NGF4 316 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OR52B4Q8NGK2 314 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OR1S2Q8NGQ3 325 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 OTOSQ8NHW6 89 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 GRHL3Q8TE85 626 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 RNF128Q8TEB7 428 aa7.25□□□□□ -1.25
CCDC93-208ENST00000474546 SEH1LQ96EE3 360 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms