RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 RDH5Q92781 318 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 MARS2Q96GW9 593 aaKnown RBP15.32■□□□□ 0.04
UPF3A-203ENST00000474056 SAMD8Q96LT4 415 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 BTBD10Q9BSF8 475 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 WACQ9BTA9 647 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 OR2J1Q9GZK6 312 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 MUC13Q9H3R2 512 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 HINT3Q9NQE9 182 aaKnown RBP15.32■□□□□ 0.04
UPF3A-203ENST00000474056 GPR160Q9UJ42 338 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 NDRG4Q9ULP0 352 aaKnown RBP15.32■□□□□ 0.04
UPF3A-203ENST00000474056 DNHD1Q96M86 4753 aa15.32■□□□□ 0.04
UPF3A-203ENST00000474056 ARPC3O15145 178 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 SGCEO43556 437 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 ICMTO60725 284 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 COX5BP10606 129 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 HIST1H1CP16403 213 aaKnown RBP15.31■□□□□ 0.04
UPF3A-203ENST00000474056 ACHEP22303 614 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 GCH1P30793 250 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 HTR5AP47898 357 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 CHN2P52757 468 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 PPP1CBP62140 327 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 PPP1R8Q12972 351 aaKnown RBP15.31■□□□□ 0.04
UPF3A-203ENST00000474056 TSPAN31Q12999 210 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 AQP6Q13520 282 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 TRIM25Q14258 630 aaKnown RBP15.31■□□□□ 0.04
UPF3A-203ENST00000474056 LEG1Q6P5S2 330 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 TMEM154Q6P9G4 183 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 ZNF620Q6ZNG0 422 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 VASH1Q7L8A9 365 aaPredicted RBP15.31■□□□□ 0.04
UPF3A-203ENST00000474056 JAZF1Q86VZ6 243 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 DHFR2Q86XF0 187 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 GLB1L2Q8IW92 636 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 KLF14Q8TD94 323 aaPredicted RBP15.31■□□□□ 0.04
UPF3A-203ENST00000474056 C4orf45Q96LM5 186 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 SNX18Q96RF0 628 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 NMNAT3Q96T66 252 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 IFT27Q9BW83 186 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 CHODLQ9H9P2 273 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 ZNF275Q9NSD4 429 aaPredicted RBP15.31■□□□□ 0.04
UPF3A-203ENST00000474056 TMEM160Q9NX00 188 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 FAM53CQ9NYF3 392 aa15.31■□□□□ 0.04
UPF3A-203ENST00000474056 LOC100289279A0A1B0GTE1 492 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 TNFRSF11BO00300 401 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 LMX1BO60663 402 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 KRT36O76013 467 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 ABHD16AO95870 558 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 GAAP10253 952 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 IGFBP5P24593 272 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 IFNGR2P38484 337 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 GPR6P46095 362 aaPredicted RBP15.3■□□□□ 0.04
UPF3A-203ENST00000474056 HMGA2P52926 109 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 LSM6P62312 80 aaKnown RBP15.3■□□□□ 0.04
UPF3A-203ENST00000474056 CCL8P80075 99 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 MEP1BQ16820 701 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 CHRFAM7AQ494W8 412 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 MBNL2Q5VZF2 373 aaKnown RBP15.3■□□□□ 0.04
UPF3A-203ENST00000474056 FAM166AQ6J272 317 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 UNQ6126/PRO20091Q6UXV3 157 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 OR4C15Q8NGM1 316 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 OR4K13Q8NH42 304 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 SLC7A6Q92536 515 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 CCDC124Q96CT7 223 aaKnown RBP15.3■□□□□ 0.04
UPF3A-203ENST00000474056 CLPTM1LQ96KA5 538 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 MAGIXQ9H6Y5 334 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 EGLN3Q9H6Z9 239 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 ELOVL3Q9HB03 270 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 VNN3Q9NY84 501 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 PLEK2Q9NYT0 353 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 TAS2R1Q9NYW7 299 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 ASH2LQ9UBL3 628 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 PRPF19Q9UMS4 504 aaKnown RBP15.3■□□□□ 0.04
UPF3A-203ENST00000474056 B9D1Q9UPM9 204 aa15.3■□□□□ 0.04
UPF3A-203ENST00000474056 DYSFO75923 2080 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 IGLV1-36A0A0B4J1U3 117 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 RP2O75695 350 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 CRABP1P29762 137 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 CENPAP49450 140 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 MMP15P51511 669 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 MOGQ16653 247 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 CCDC92Q53HC0 331 aaPredicted RBP15.29■□□□□ 0.04
UPF3A-203ENST00000474056 DNM1P34Q6PK57 102 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.29■□□□□ 0.04
UPF3A-203ENST00000474056 OR6V1Q8N148 313 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 SDR9C7Q8NEX9 313 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 C1orf21Q9H246 121 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 FN3KQ9H479 309 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 POFUT1Q9H488 388 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 SRA1Q9HD15 236 aaKnown RBP15.29■□□□□ 0.04
UPF3A-203ENST00000474056 RPRD1BQ9NQG5 326 aaKnown RBP15.29■□□□□ 0.04
UPF3A-203ENST00000474056 NKIRAS2Q9NYR9 191 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 KCNS2Q9ULS6 477 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 POLR1DQ9Y2S0 133 aa15.29■□□□□ 0.04
UPF3A-203ENST00000474056 RER1O15258 196 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 CDC14BO60729 498 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 CCNB2O95067 398 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 RENP00797 406 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 TGFAP01135 160 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 NOS3P29474 1203 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 ZNF81P51508 661 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 ARHGDIAP52565 204 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms