RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PDLIM4P50479 330 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 CD300LDQ6UXZ3 194 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 Q71RC1 249 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 C1orf174Q8IYL3 243 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 ZNF101Q8IZC7 436 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 PAPD5Q8NDF8 572 aaKnown RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 NPEPL1Q8NDH3 523 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 OR52L1Q8NGH7 329 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 OR8D4Q8NGM9 314 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 SYNPRQ8TBG9 265 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 RACGAP1Q9H0H5 632 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 OR51B6Q9H340 312 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 SRA1Q9HD15 236 aaKnown RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 EIF3KQ9UBQ5 218 aaKnown RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 FN1P02751 2386 aaKnown RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 LOC390937A0A1W2PQ73 354 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 ARRDC5A6NEK1 342 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 SGCEO43556 437 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 GPANK1O95872 356 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 ALDH3B1P43353 468 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 RASSF2P50749 326 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 KLF3P57682 345 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-215ENST00000470338 SELENOVP59797 346 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.12□□□□□ -0.47
TOP3B-215ENST00000470338 LOXL1Q08397 574 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-215ENST00000470338 COX10Q12887 443 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 CLEC12AQ5QGZ9 265 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 OTPQ5XKR4 325 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 UNQ6126/PRO20091Q6UXV3 157 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-215ENST00000470338 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 SPATA24Q86W54 205 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 LNX2Q8N448 690 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 SDR9C7Q8NEX9 313 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 OR10G2Q8NGC3 310 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 OR52E2Q8NGJ4 325 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 GIPC3Q8TF64 312 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 MARS2Q96GW9 593 aaKnown RBP12.12□□□□□ -0.47
TOP3B-215ENST00000470338 FEVQ99581 238 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 RPRD1BQ9NQG5 326 aaKnown RBP12.12□□□□□ -0.47
TOP3B-215ENST00000470338 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
TOP3B-215ENST00000470338 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 DOK2O60496 412 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 NGFP01138 241 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 TFP02787 698 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 DAOP14920 347 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 GIFP27352 417 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 GLO1Q04760 184 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 DBPQ10586 325 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-215ENST00000470338 MAD2L1BPQ15013 274 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-215ENST00000470338 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 CCDC92Q53HC0 331 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-215ENST00000470338 ZNF786Q8N393 782 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 SLC26A10Q8NG04 563 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 SLCO4A1Q96BD0 722 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 C4orf45Q96LM5 186 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 NIPSNAP1Q9BPW8 284 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 TSSK6Q9BXA6 273 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 MMADHCQ9H3L0 296 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-215ENST00000470338 TPK1Q9H3S4 243 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 ELOVL3Q9HB03 270 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 TBC1D23Q9NUY8 699 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 SLCO1C1Q9NYB5 712 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 BAIAP2Q9UQB8 552 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
TOP3B-215ENST00000470338 A0A1W2PPW3 197 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 GNGT2O14610 69 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 RER1O15258 196 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 FKBP6O75344 327 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 NAT2P11245 290 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 HOXB4P17483 251 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-215ENST00000470338 NR4A2P43354 598 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 HTR5AP47898 357 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 CENPAP49450 140 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 CBX1P83916 185 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 TEKQ02763 1124 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 MOGQ16653 247 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 MEP1BQ16820 701 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
TOP3B-215ENST00000470338 ARL9Q6T311 187 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 RFPL4BQ6ZWI9 263 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 ICA1LQ8NDH6 482 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 OR4Q3Q8NH05 313 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 OR1F12Q8NHA8 337 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms