RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ESPNLQ6ZVH7 1005 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 HIST2H3AQ71DI3 136 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 LINGO2Q7L985 606 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 DCXRQ7Z4W1 244 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 PIP4P1Q86T03 277 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF227Q86WZ6 799 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 LYPD6Q86Y78 171 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 ELMOD2Q8IZ81 293 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 CMTM4Q8IZR5 234 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 BEST3Q8N1M1 668 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 CELF2-AS1Q8N7Q2 184 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 NKAIN3Q8N8D7 197 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SUMF1Q8NBK3 374 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 OR6F1Q8NGZ6 308 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 LGALS14Q8TCE9 139 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 HPS1Q92902 700 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 PNPLA2Q96AD5 504 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SLC25A38Q96DW6 304 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 RNF31Q96EP0 1072 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 GNRHR2Q96P88 292 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 EDEM2Q9BV94 578 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 ACTR6Q9GZN1 396 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 LIN7BQ9HAP6 207 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 MOV10Q9HCE1 1003 aaKnown RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 FAM206AQ9NX38 181 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 GLTPQ9NZD2 209 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 OR5V1Q9UGF6 321 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 NUFIP1Q9UHK0 495 aaKnown RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 DKKL1Q9UK85 242 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 OR52A1Q9UKL2 312 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 CDV3Q9UKY7 258 aaKnown RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 DHDHQ9UQ10 334 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 RCE1Q9Y256 329 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 TTC28Q96AY4 2481 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 TRAV8-7A0A075B6U6 113 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1W2PNU3 283 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 LRRC3CA6NJW4 275 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ANXA2P2A6NMY6 339 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF814B7Z6K7 855 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF878C9JN71 531 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 BOLA2-SMG1P6H3BVE0 249 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 AGRPO00253 132 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 XRCC3O43542 346 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 SSX4O60224 188 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 MPZL1O95297 269 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 APOC1P02654 83 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ANXA2P07355 339 aaKnown RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 QDPRP09417 244 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 GSTT2BP0CG30 244 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 CCL1P22362 96 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 RPS27P42677 84 aaKnown RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 PTH2RP49190 550 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 SOX8P57073 446 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 RAB25P57735 213 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 PSMA6P60900 246 aaKnown RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 GRB2P62993 217 aaKnown RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 GABREP78334 506 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 FMODQ06828 376 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 C19orf57Q0VDD7 668 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 AIMP2Q13155 320 aaKnown RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 GPR176Q14439 515 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 CSRP2Q16527 193 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 NRN1LQ496H8 165 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 C1orf100Q5SVJ3 147 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF468Q5VIY5 522 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 RAET1LQ5VY80 246 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 OR7E24Q6IFN5 339 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF529Q6P280 563 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ANKRD16Q6P6B7 361 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 LRFN4Q6PJG9 635 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 KLHL24Q6TFL4 600 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 IGF2-ASQ6U949 168 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 Q6ZSR3 168 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 FCRLAQ7L513 359 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 MDGA2Q7Z553 956 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 SYT9Q86SS6 491 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 WDFY1Q8IWB7 410 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 TMEM123Q8N131 208 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF433Q8N7K0 673 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 OR9K2Q8NGE7 335 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 OR6M1Q8NGM8 313 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 SLAMF6Q96DU3 332 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ADGRG7Q96K78 797 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 HDHD2Q9H0R4 259 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ZFP64Q9NPA5 681 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 DDX28Q9NUL7 540 aaKnown RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 EMC3Q9P0I2 261 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ABI3Q9P2A4 366 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 FBLN5Q9UBX5 448 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 MALT1Q9UDY8 824 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 FOXD3Q9UJU5 478 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 GDF2Q9UK05 429 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 ING1Q9UK53 422 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 BOKQ9UMX3 212 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-208ENST00000468792 FLVCR1Q9Y5Y0 555 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 NUBP2Q9Y5Y2 271 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 LHFPL6Q9Y693 200 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 CACNG2Q9Y698 323 aa6.76□□□□□ -1.33
COL6A3-208ENST00000468792 KMT2EQ8IZD2 1858 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms