RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PTDSS2Q9BVG9 487 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 EXO5Q9H790 373 aa13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 MRPL22Q9NWU5 206 aaKnown RBP13.23□□□□□ -0.29
PRPF38B-204ENST00000467302 TRAV36DV7A0A075B6V5 113 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 XKRYO14609 159 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 WISP1O95388 367 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 DDAH2O95865 285 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 IGKV3-11P04433 115 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 MPGP29372 298 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ACTBP60709 375 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ACTG1P63261 375 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 SIGLEC14Q08ET2 396 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 HLA-BQ31612 363 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 C4orf46Q504U0 113 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 PEAR1Q5VY43 1037 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC18B1Q6NT16 456 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 GUSBP11Q6P575 273 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 CDH26Q8IXH8 852 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 EIF4E3Q8N5X7 224 aaKnown RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 OR5M9Q8NGP3 310 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 OR8S1Q8NH09 359 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ASB5Q8WWX0 329 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ATG5Q9H1Y0 275 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 POFUT1Q9H488 388 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 TMEM138Q9NPI0 162 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 PFDN2Q9UHV9 154 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 MRTO4Q9UKD2 239 aaKnown RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ATXN7L1Q9ULK2 861 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 IGLV1-36A0A0B4J1U3 117 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 LY6G6EA0A0G2JKS1 128 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 RFPL4AA6NLU0 287 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 C11orf98E9PRG8 122 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 RFPL4AL1F8VTS6 287 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 DOK2O60496 412 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 RAD1O60671 282 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 IGFBP3P17936 291 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 CXCR1P25024 350 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 TAS2R19P59542 299 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 INSM1Q01101 510 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ACY1Q03154 408 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 LY6G6FQ5SQ64 297 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 ZNF574Q6ZN55 896 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 TMPRSS9Q7Z410 1059 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 HSD17B13Q7Z5P4 300 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 TMEM229BQ8NBD8 167 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 BVESQ8NE79 360 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 STK35Q8TDR2 534 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 DUSP19Q8WTR2 217 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 DAZLQ92904 295 aaKnown RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 FOXN4Q96NZ1 517 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 NKX3-1Q99801 234 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 SLC7A5P2Q9GIP4 190 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 VSX1Q9NZR4 365 aaPredicted RBP13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 MKL2Q9ULH7 1088 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 U3KQA8 63 aa13.22□□□□□ -0.29
PRPF38B-204ENST00000467302 RP1P56715 2156 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 PI4KAP42356 2102 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 HCRTR2O43614 444 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 SIGLEC6O43699 453 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 PMS2P2O95744 297 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 FCER2P06734 321 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 OR4E1P0C645 316 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 FSTP19883 344 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 EFNA3P52797 238 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 RPL27P61353 136 aaKnown RBP13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 DCAF7P61962 342 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 MELKQ14680 651 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 ACKR1Q16570 336 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 SGCBQ16585 318 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 TFAP2EQ6VUC0 442 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 NDUFAF7Q7L592 441 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 CATSPERDQ86XM0 798 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 PRR22Q8IZ63 422 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 METTL21AQ8WXB1 218 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 DNAJA3Q96EY1 480 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 NUDT9Q9BW91 350 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 MFFQ9GZY8 342 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 MYOZ1Q9NP98 299 aaPredicted RBP13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 FSCN3Q9NQT6 498 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 DHDHQ9UQ10 334 aa13.21□□□□□ -0.29
PRPF38B-204ENST00000467302 GMFGO60234 142 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 SLC16A7O60669 478 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 NPIPB7O75200 414 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 MT-ATP6P00846 226 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 SORDQ00796 357 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 BTN1A1Q13410 526 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 GLT8D1Q68CQ7 371 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 MAMDC2Q7Z304 686 aaPredicted RBP13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 PDZD9Q8IXQ8 264 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 CCDC107Q8WV48 283 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms