RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TMEM43Q9BTV4 400 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 MND1Q9BWT6 205 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 RNF122Q9H9V4 155 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 CALHM2Q9HA72 323 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 NDUFB11Q9NX14 153 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 PFDN2Q9UHV9 154 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 KIF25Q9UIL4 384 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 SLC5A6Q9Y289 635 aa8.75□□□□□ -1.01
CCDC171-203ENST00000449575 TRAV36DV7A0A075B6V5 113 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 KRBOX1C9JBD0 128 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 TNFRSF11BO00300 401 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 SNAPC5O75971 98 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 AHSA1O95433 338 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 HMGN1P05114 100 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 H1F0P07305 194 aaKnown RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 FAM157BP0CG42 384 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 ANXA3P12429 323 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 SPHARQ15513 63 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 FCRLAQ7L513 359 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 P4HA3Q7Z4N8 544 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 OR10G2Q8NGC3 310 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 RNF128Q8TEB7 428 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 WNT2BQ93097 391 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 CPNE4Q96A23 557 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 PRRG4Q9BZD6 226 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 RDH8Q9NYR8 311 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 A0A1B0GUH1 482 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 MAKP20794 623 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 STOMP27105 288 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 GRPRP30550 384 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 NUP62P37198 522 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 MAP2K6P52564 334 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 SIRPAP78324 504 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 MLLT11Q13015 90 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 HNRNPA0Q13151 305 aaKnown RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 BTN1A1Q13410 526 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 EXOSC2Q13868 293 aaKnown RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF273Q14593 569 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 TRAM2Q15035 370 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 KLHL22Q53GT1 634 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 FAM69AQ5T7M9 428 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 RNLSQ5VYX0 342 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 BTN2A1Q7KYR7 527 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 WDFY1Q8IWB7 410 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 TUSC5Q8IXB3 177 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 MFSD8Q8NHS3 518 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF417Q8TAU3 575 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 FBXW5Q969U6 566 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 UPRTQ96BW1 309 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF587Q96SQ5 575 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 FEVQ99581 238 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 GPA33Q99795 319 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 GSX2Q9BZM3 304 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 MCTS1Q9ULC4 181 aaKnown RBP8.74□□□□□ -1.01
CCDC171-203ENST00000449575 PTPN13Q12923 2485 aa8.74□□□□□ -1.01
CCDC171-203ENST00000449575 CENPEQ02224 2701 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CELSR2Q9HCU4 2923 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF716A6NP11 495 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CDC42EP2O14613 210 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 TNFSF13O75888 250 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 RCBTB2O95199 551 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 GADD45GO95257 159 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 SYNGR4O95473 234 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 HLA-DOBP13765 273 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PTGER4P35408 488 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 TIMP3P35625 211 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 KIR2DL2P43627 348 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 GPR4P46093 362 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 LIMS1P48059 325 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CSNK2A1P68400 391 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF74Q16587 644 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 EXOC3L2Q2M3D2 409 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 HSD17B12Q53GQ0 312 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PDSS1Q5T2R2 415 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 C10orf53Q8N6V4 93 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 ITLN2Q8WWU7 325 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 RND1Q92730 232 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 POLR2J2Q9GZM3 115 aaKnown RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 POLR2J3Q9H1A7 115 aaKnown RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 HEXA-AS1Q9H8Q6 139 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PCDHB16Q9NRJ7 776 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PLEKHB1Q9UF11 243 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 BAIAP2Q9UQB8 552 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PRELID3BQ9Y3B1 194 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CDH10Q9Y6N8 788 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 A0A1B0GVI7 797 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 hCG_1807616A0A1W2PRN6 198 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 AGFG2O95081 481 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 IL2RAP01589 272 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 BMP5P22003 454 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 FKBP2P26885 142 aaKnown RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 SLC35A1P78382 337 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 FLI1Q01543 452 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 GUSBP1Q15486 140 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CD276Q5ZPR3 534 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 ABLIM2Q6H8Q1 611 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PAQR6Q6TCH4 344 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms