RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 H3BN98 237 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 IDH3BO43837 385 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 CD5LO43866 347 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 SSX4O60224 188 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 DOK2O60496 412 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 TIPRLO75663 272 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 SNAP29O95721 258 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 LCKP06239 509 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 STOMP27105 288 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 GDI2P50395 445 aaKnown RBP12.55□□□□□ -0.4
USP39-206ENST00000448971 ARHGDIAP52565 204 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 PSG4Q00888 419 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 AQP6Q13520 282 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 OTPQ5XKR4 325 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 RGS7BPQ6MZT1 257 aaPredicted RBP12.55□□□□□ -0.4
USP39-206ENST00000448971 UGT2A3Q6UWM9 527 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
USP39-206ENST00000448971 OR2T33Q8NG76 320 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 SNX18Q96RF0 628 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 FEVQ99581 238 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 VRK1Q99986 396 aaPredicted RBP12.55□□□□□ -0.4
USP39-206ENST00000448971 RACGAP1Q9H0H5 632 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 IL20Q9NYY1 176 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 DNAJB9Q9UBS3 223 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 TIMM10BQ9Y5J6 103 aa12.55□□□□□ -0.4
USP39-206ENST00000448971 A0A1W2PPW3 197 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 C5orf49A4QMS7 147 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 BHLHE40O14503 412 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 DEAF1O75398 565 aaPredicted RBP12.54□□□□□ -0.4
USP39-206ENST00000448971 IFNA2P01563 188 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 HLA-DQA2P01906 255 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 SCG5P05408 212 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 IGFBP1P08833 259 aaPredicted RBP12.54□□□□□ -0.4
USP39-206ENST00000448971 GLRXP35754 106 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 HTR5AP47898 357 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 GLO1Q04760 184 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 SWI5Q1ZZU3 235 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 SLC36A3Q495N2 470 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 TMEM179BQ7Z7N9 219 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 HS3ST5Q8IZT8 346 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
USP39-206ENST00000448971 OR10H5Q8NGA6 315 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 MRPL24Q96A35 216 aaKnown RBP12.54□□□□□ -0.4
USP39-206ENST00000448971 SLCO4A1Q96BD0 722 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 SRA1Q9HD15 236 aaKnown RBP12.54□□□□□ -0.4
USP39-206ENST00000448971 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 NDRG4Q9ULP0 352 aaKnown RBP12.54□□□□□ -0.4
USP39-206ENST00000448971 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 BAIAP2Q9UQB8 552 aa12.54□□□□□ -0.4
USP39-206ENST00000448971 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 DCTN6O00399 190 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 EBAG9O00559 213 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 SGCEO43556 437 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 MPZL1O95297 269 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 GPANK1O95872 356 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 TP53P04637 393 aaPredicted RBP12.53□□□□□ -0.4
USP39-206ENST00000448971 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
USP39-206ENST00000448971 GAAP10253 952 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 PPOXP50336 477 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 MEP1BQ16820 701 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 MST1LQ2TV78 715 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 CLEC2AQ6UVW9 174 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 ATG16L2Q8NAA4 619 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
USP39-206ENST00000448971 PROKR2Q8NFJ6 384 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 SORCS2Q96PQ0 1159 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 WACQ9BTA9 647 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
USP39-206ENST00000448971 BCL2L14Q9BZR8 327 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 PLEK2Q9NYT0 353 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
USP39-206ENST00000448971 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
USP39-206ENST00000448971 B9D1Q9UPM9 204 aa12.53□□□□□ -0.4
USP39-206ENST00000448971 OR6C68A6NDL8 312 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 RIIAD1A6NNX1 92 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 M0R233 179 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 IFNGP01579 166 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 ZNF3P17036 446 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 POU1F1P28069 291 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 RAD52P43351 418 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 EFNA4P52798 201 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 ERVS71-1P61550 626 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.41
USP39-206ENST00000448971 DBPQ10586 325 aaPredicted RBP12.52□□□□□ -0.41
USP39-206ENST00000448971 COX10Q12887 443 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 CRMP1Q14194 572 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 UNQ6126/PRO20091Q6UXV3 157 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 LNX2Q8N448 690 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 IQCF1Q8N6M8 205 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms