RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TMEM54Q969K7 222 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 LIN7BQ9HAP6 207 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 RBFOX1Q9NWB1 397 aaKnown RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 SLC22A13Q9Y226 551 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 MRPS18BQ9Y676 258 aaKnown RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 A0A0G2JMM0 328 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 LINC00854A0A1B0GVQ3 168 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 A0A1W2PPB8 328 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 A0A1W2PRS3 328 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 KIR3DP1A8MWS1 328 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 PLA2G10O15496 165 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 LYRM1O43325 122 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 TPPPO94811 219 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 CD96P40200 585 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 MAGEB1P43366 347 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 MMP15P51511 669 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 LSM6P62312 80 aaKnown RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 MADCAM1Q13477 382 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 ODF4Q2M2E3 257 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 ZNF57Q68EA5 555 aaPredicted RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 LRFN4Q6PJG9 635 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 YRDCQ86U90 279 aaKnown RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 RDH10Q8IZV5 341 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 OR51A4Q8NGJ6 313 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 OR10AC1Q8NH08 325 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 NKD1Q969G9 470 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 ORAI1Q96D31 301 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 THAP7Q9BT49 309 aaPredicted RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 ABCG5Q9H222 651 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 G6PC2Q9NQR9 355 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 GDF2Q9UK05 429 aaPredicted RBP13.93□□□□□ -0.18
SNX13-204ENST00000444712 MYO15AQ9UKN7 3530 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 A0A087WV48 116 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 MEGF11A6BM72 1044 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 WNT11O96014 354 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 SUCLG1P53597 346 aaKnown RBP13.92□□□□□ -0.18
SNX13-204ENST00000444712 GABREP78334 506 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 STPG1Q5TH74 334 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 TMPRSS12Q86WS5 348 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 ASB5Q8WWX0 329 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 OR2M2Q96R28 347 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 PARD6AQ9NPB6 346 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 STEAP1Q9UHE8 339 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 PCNX2A6NKB5 2137 aa13.92□□□□□ -0.18
SNX13-204ENST00000444712 EIF1AYO14602 144 aaKnown RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 SULT1B1O43704 296 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 TRAPPC6AO75865 159 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 MAS1P04201 325 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 FTH1P19P0C7X4 201 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 ADRA2CP18825 462 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 POU3F2P20265 443 aaPredicted RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 HSD11B1P28845 292 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 CARD18P57730 90 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 CORO6Q6QEF8 472 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 OR13C3Q8NGS6 347 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 OR2V1Q8NHB1 315 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 S100A16Q96FQ6 103 aaKnown RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 DEPPQ9NTK1 212 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 FBXL3Q9UKT7 428 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 RCE1Q9Y256 329 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 LHFPL6Q9Y693 200 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 ZNF318Q5VUA4 2279 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 TRAV8-7A0A075B6U6 113 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 A0A0B4J203 849 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 GSTZ1O43708 216 aaPredicted RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 SSX4O60224 188 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 NEURL1O76050 574 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 MSR1P21757 451 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 ZNF84P51523 738 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 ART1P52961 327 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 GRB2P62993 217 aaKnown RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 MRPS10P82664 201 aaKnown RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 FOXO1Q12778 655 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 TAF13Q15543 124 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 GLT8D1Q68CQ7 371 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 PLET1Q6UQ28 207 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 FOXL2NBQ6ZUU3 175 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 GGNQ86UU5 652 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 CELF2-AS1Q8N7Q2 184 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 DUSP18Q8NEJ0 188 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 DEFB124Q8NES8 71 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 OR2M7Q8NG81 312 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 TRIM63Q969Q1 353 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 NELFAQ9H3P2 528 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 FAM206AQ9NX38 181 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 CDV3Q9UKY7 258 aaKnown RBP13.91□□□□□ -0.18
SNX13-204ENST00000444712 GPR179Q6PRD1 2367 aa13.91□□□□□ -0.18
SNX13-204ENST00000444712 PHF3Q92576 2039 aaKnown RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 FAM240BA0A1B0GVZ2 78 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 LOC107986453A0A1B0GWG9 222 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 CENPXA8MT69 81 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 SMAD9O15198 467 aaKnown RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 KLK2P20151 261 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 EIF1AXP47813 144 aaKnown RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 PSMA6P60900 246 aaKnown RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 AGAP6Q5VW22 663 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 FCRLAQ7L513 359 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms