RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TRAM2Q15035 370 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 LRRC23Q53EV4 343 aaPredicted RBP11.67□□□□□ -0.54
PTPRE-203ENST00000442830 CYBRD1Q53TN4 286 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 ESCO2Q56NI9 601 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 TTMPQ5BVD1 217 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 DOK3Q7L591 496 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 ARPINQ7Z6K5 226 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 OAFQ86UD1 273 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 OFCC1Q8IZS5 231 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 DVL3Q92997 716 aaPredicted RBP11.67□□□□□ -0.54
PTPRE-203ENST00000442830 THOC1Q96FV9 657 aaKnown RBP11.67□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF747Q9BV97 191 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 FNDC11Q9BVV2 318 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF696Q9H7X3 374 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 PATZ1Q9HBE1 687 aaKnown RBP11.67□□□□□ -0.54
PTPRE-203ENST00000442830 POLE4Q9NR33 117 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 OPN4Q9UHM6 478 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 LRCH1Q9Y2L9 728 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 FBP2O00757 339 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 MRASO14807 208 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 SGCEO43556 437 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 DOK2O60496 412 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 IFNW1P05000 195 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 SBK2P0C263 348 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF12P17014 697 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 PRTN3P24158 256 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 KDELR2P33947 212 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
PTPRE-203ENST00000442830 OR1E2P47887 323 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 HTR5AP47898 357 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 MTNR1AP48039 350 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 BTG1P62324 171 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 PSG7Q13046 419 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 AQP6Q13520 282 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 RABL3Q5HYI8 236 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 PRR31Q5SQ13 230 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF774Q6NX45 483 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 RRM2BQ7LG56 351 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 LRRC28Q86X40 367 aaPredicted RBP11.66□□□□□ -0.54
PTPRE-203ENST00000442830 OR2T12Q8NG77 320 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 OR5L1Q8NGL2 311 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 C10orf82Q8WW14 230 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 GEMIN6Q8WXD5 167 aaKnown RBP11.66□□□□□ -0.54
PTPRE-203ENST00000442830 TPD52L3Q96J77 140 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF583Q96ND8 569 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 DCLRE1CQ96SD1 692 aaKnown RBP11.66□□□□□ -0.54
PTPRE-203ENST00000442830 ANKRD19PQ9H560 264 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 GRHPRQ9UBQ7 328 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 OR5V1Q9UGF6 321 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 PPP1R3CQ9UQK1 317 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 TMEM5Q9Y2B1 443 aa11.66□□□□□ -0.54
PTPRE-203ENST00000442830 EFCAB9A8MZ26 197 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 CLDN34H7C241 214 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 FXYD1O00168 92 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 FSTL3O95633 263 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 NGFP01138 241 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 RAC2P15153 192 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 TNFRSF1BP20333 461 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 IL13RA1P78552 427 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 GUCY1A3Q02108 690 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 PRKCDQ05655 676 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF154Q13106 437 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 ENDOGQ14249 297 aaKnown RBP11.65□□□□□ -0.54
PTPRE-203ENST00000442830 PGM2L1Q6PCE3 622 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 BTNL3Q6UXE8 466 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 OR2Z1Q8NG97 314 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 ACOT11Q8WXI4 607 aaPredicted RBP11.65□□□□□ -0.54
PTPRE-203ENST00000442830 PTP4A1Q93096 173 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 SLC25A28Q96A46 364 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 PLEKHA8Q96JA3 519 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 VIPAS39Q9H9C1 493 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 MSL2Q9HCI7 577 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 ESM1Q9NQ30 184 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 A4GNTQ9UNA3 340 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
PTPRE-203ENST00000442830 TEX13CA0A0J9YWL9 993 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 ELOVL7A1L3X0 281 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 POM121CA8CG34 1229 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 F5H0A9 414 aaPredicted RBP11.64□□□□□ -0.55
PTPRE-203ENST00000442830 SLC22A2O15244 555 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 SHOX2O60902 331 aaPredicted RBP11.64□□□□□ -0.55
PTPRE-203ENST00000442830 CD14P08571 375 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 RPL4P36578 427 aaKnown RBP11.64□□□□□ -0.55
PTPRE-203ENST00000442830 SLC6A9P48067 706 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
PTPRE-203ENST00000442830 GPR139Q6DWJ6 353 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 LRRN1Q6UXK5 716 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 HDXQ7Z353 690 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 CYP4Z1Q86W10 505 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 NRMQ8IXM6 262 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 MICU2Q8IYU8 434 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 LRRC75AQ8NAA5 344 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 RASD2Q96D21 266 aa11.64□□□□□ -0.55
PTPRE-203ENST00000442830 HAVCR1Q96D42 359 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms