RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 OR51A7Q8NH64 312 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 FGFBP3Q8TAT2 258 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 ABHD4Q8TB40 342 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 YIPF5Q969M3 257 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 FAM162AQ96A26 154 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 MCUR1Q96AQ8 359 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 ZMYND19Q96E35 227 aaPredicted RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 MARS2Q96GW9 593 aaKnown RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 GPA33Q99795 319 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 OR2H1Q9GZK4 316 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 CCDC134Q9H6E4 229 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 METTL17Q9H7H0 456 aaPredicted RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 NTN4Q9HB63 628 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 MED4Q9NPJ6 270 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 FGFR1OP2Q9NVK5 253 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 ATPIF1Q9UII2 106 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 A4GNTQ9UNA3 340 aa6.63□□□□□ -1.35
CD44-211ENST00000442151 SAMD4AQ9UPU9 718 aaKnown RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 NOP16Q9Y3C1 178 aaKnown RBP6.63□□□□□ -1.35
CD44-211ENST00000442151 PPIAL4EA0A075B759 164 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 PPIAL4CA0A0B4J2A2 164 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 PPIAL4DF5H284 164 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 FXYD1O00168 92 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 IMPA2O14732 288 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 SPRY3O43610 288 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 CDC14BO60729 498 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 RP2O75695 350 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 SLC2A10O95528 541 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 IGFBP1P08833 259 aaPredicted RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 PPIAL4FP0DN26 164 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 COX4I1P13073 169 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 CCL2P13500 99 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 SELEP16581 610 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 RHCEP18577 417 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 MAGEB1P43366 347 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 LMO4P61968 165 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 MVKQ03426 396 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 RUNX1T1Q06455 604 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 ALKBH6Q3KRA9 238 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 DCAF12L2Q5VW00 463 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 IL17RELQ6ZVW7 336 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 ADCK1Q86TW2 530 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 NRMQ8IXM6 262 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 KLHL36Q8N4N3 616 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 SLC25A40Q8TBP6 338 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 KLF14Q8TD94 323 aaPredicted RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 CCL17Q92583 94 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 POP5Q969H6 163 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 RCN3Q96D15 328 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 NMD3Q96D46 503 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 SAMD8Q96LT4 415 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 ZNF570Q96NI8 536 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 GAL3ST1Q99999 423 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 KCTD14Q9BQ13 255 aaPredicted RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 OR51B6Q9H340 312 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 POLE4Q9NR33 117 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 C20orf141Q9NUB4 165 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 MYEF2Q9P2K5 600 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 UGT2A1Q9Y4X1 527 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 ENPP4Q9Y6X5 453 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 SGCEO43556 437 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 SHOX2O60902 331 aaPredicted RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 H1F0P07305 194 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 TNFRSF1BP20333 461 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 PRDX6P30041 224 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 IL2RGP31785 369 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 CDAP32320 146 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 ERVK-25P63136 954 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 TNFAIP6P98066 277 aaPredicted RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 CDK5R2Q13319 367 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 AQP6Q13520 282 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 DPY19L2P2Q6ZN68 376 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 MEX3DQ86XN8 651 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 SLC15A3Q8IY34 581 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 MUC20Q8N307 709 aaPredicted RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 BPIFB2Q8N4F0 458 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 GJC3Q8NFK1 279 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 AKR7LQ8NHP1 331 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 NABP1Q96AH0 204 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 RASD2Q96D21 266 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 OR2J1Q9GZK6 312 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 NSRP1Q9H0G5 558 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 NARFLQ9H6Q4 476 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 ZMAT3Q9HA38 289 aaKnown RBP6.62□□□□□ -1.35
CD44-211ENST00000442151 NDE1Q9NXR1 346 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 PLEK2Q9NYT0 353 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 KLHL21Q9UJP4 597 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 WIPI2Q9Y4P8 454 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 NPTNQ9Y639 398 aa6.62□□□□□ -1.35
CD44-211ENST00000442151 A0A1W2PRQ8 180 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 ISPDA4D126 451 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 PRSS37A4D1T9 235 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 OR6C6A6NF89 314 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 LRRC30A6NM36 301 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 ATP8B1O43520 1251 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 IDH3BO43837 385 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 RENP00797 406 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms