RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 STARD4Q96DR4 205 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 BMFQ96LC9 184 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PLIN2Q99541 437 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SH3GL1Q99961 368 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TCHPQ9BT92 498 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SLC17A9Q9BYT1 436 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 GPR61Q9BZJ8 451 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 VCXQ9H320 206 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 MYOZ2Q9NPC6 264 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 DMAP1Q9NPF5 467 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 RRAGDQ9NQL2 400 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SHPKQ9UHJ6 478 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CTNNA3Q9UI47 895 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 NUP50Q9UKX7 468 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 KIAA1257Q9ULG3 409 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 RABL2BQ9UNT1 228 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ATP6V1DQ9Y5K8 247 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 MYH1P12882 1939 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 AHDC1Q5TGY3 1603 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ELP1O95163 1332 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ABCC12Q96J65 1359 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TIAM2Q8IVF5 1701 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 DOT1LQ8TEK3 1739 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 DISP2A7MBM2 1401 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SBF2Q86WG5 1849 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CDK5RAP2Q96SN8 1893 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 BAZ2AQ9UIF9 1905 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 LRP5O75197 1615 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ROBO1Q9Y6N7 1651 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 IGLV4-69A0A075B6H9 119 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 IGLV11-55A0A075B6I3 123 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 A0A096LNJ9 63 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 IGKV1D-13A0A0B4J2D9 117 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 A0A0U1RQS6 177 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 HEATR9A2RTY3 570 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SMCO2A6NFE2 343 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 HIDE1A8MVS5 230 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ERVV-1B6SEH8 477 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CDC7O00311 574 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 LSM1O15116 133 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SPAG7O75391 227 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 WBP4O75554 376 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 EIF3GO75821 320 aaKnown RBP eCLIP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CIAO1O76071 339 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 NDUFB10O96000 172 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CST1P01037 141 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 FGGP02679 453 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 PRB2P02812 416 aaPredicted RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 BGLAPP02818 100 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 IGKV3-11P04433 115 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 FABP3P05413 133 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 IGKV1-13P0DP09 117 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF32P17041 273 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SYT1P21579 422 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 KITLGP21583 273 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SERPINB5P36952 375 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CDKN1BP46527 198 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 RPS9P46781 194 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CYB561P49447 251 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SUCLG1P53597 346 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CRISP3P54108 245 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 HMGCS1Q01581 520 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ENPEPQ07075 957 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 TCP10Q12799 353 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SLC39A6Q13433 755 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 MADCAM1Q13477 382 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 EIF4EBP2Q13542 120 aaPredicted RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 PTGES3Q15185 160 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 TTLL9Q3SXZ7 439 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 VPS26BQ4G0F5 336 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ZFP2Q6ZN57 461 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF836Q6ZNA1 936 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SLC25A48Q6ZT89 311 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 STRADAQ7RTN6 431 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ASCL5Q7RTU5 278 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 TMEM135Q86UB9 458 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CDR2LQ86X02 465 aaPredicted RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CDH26Q8IXH8 852 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 TTC5Q8N0Z6 440 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 PDIK1LQ8N165 341 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 B3GNT7Q8NFL0 401 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 PLPPR1Q8TBJ4 325 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SLC2A14Q8TDB8 520 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 GIMAP1Q8WWP7 306 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 PIBF1Q8WXW3 757 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 ANP32BQ92688 251 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 N4BP2L2Q92802 583 aaPredicted RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 FAM104AQ969W3 186 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 CCDC126Q96EE4 140 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 LLPHQ9BRT6 129 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 UPF3BQ9BZI7 483 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 IFI27L2Q9H2X8 130 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 TPK1Q9H3S4 243 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 RPF2Q9H7B2 306 aaKnown RBP1.56□□□□□ -2.16
PTPRC-208ENST00000427110 UGT1A7Q9HAW7 530 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 UGT1A10Q9HAW8 530 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 UGT1A8Q9HAW9 530 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 KCNJ16Q9NPI9 418 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 INPP5EQ9NRR6 644 aa1.56□□□□□ -2.16
PTPRC-208ENST00000427110 SAMSN1Q9NSI8 373 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms