RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ST6GALNAC3Q8NDV1 305 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 NLGN4YQ8NFZ3 816 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 OR4M2Q8NGB6 313 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 OR6M1Q8NGM8 313 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 OR14L1PQ8NHC6 308 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZFAND1Q8TCF1 268 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 Q8WTZ3 238 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ORAOV1Q8WV07 137 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM171Q8WVE6 324 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ATG4AQ8WYN0 398 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 APH1AQ96BI3 265 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 RPUSD4Q96CM3 377 aaKnown RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 MOCOSQ96EN8 888 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 KCTD7Q96MP8 289 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 GPR78Q96P69 363 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 NODALQ96S42 347 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF184Q99676 751 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TIMP4Q99727 224 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM39BQ9GZU3 492 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 TKTL2Q9H0I9 626 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF703Q9H7S9 590 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CACYBPQ9HB71 228 aaKnown RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 NOX4Q9NPH5 578 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 DUS2Q9NX74 493 aaKnown RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF224Q9NZL3 707 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 KLRF1Q9NZS2 232 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 CALML5Q9NZT1 146 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 GNG12Q9UBI6 72 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 LHX3Q9UBR4 397 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 LGALS13Q9UHV8 139 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF107Q9UII5 783 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 ABT1Q9ULW3 272 aaKnown RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SLC17A4Q9Y2C5 497 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 SAR1BQ9Y6B6 198 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 A0A1W2PP64 1363 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 FANCAO15360 1455 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 POLA1P09884 1462 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-203ENST00000414174 FYCO1Q9BQS8 1478 aa3.2□□□□□ -1.9
SF3B1-203ENST00000414174 OVOS2A0A0J9YW53 1432 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OVOS2Q6IE36 1432 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 A0A096LPI6 279 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 A0A0A6YYD5 115 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 A0A0B4J2E0 115 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 A0A1B0GX12 115 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SLC22A23A1A5C7 686 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 C1orf226A1L170 272 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GLTPD2A6NH11 291 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 LRRC30A6NM36 301 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN24A6NM45 220 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RNF212BA8MTL3 300 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PRSS46E5RG02 174 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SLC1A7O00341 560 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 MPZL2O60487 215 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ENTPD6O75354 484 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RFPL2O75678 378 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 UGT2B17O75795 530 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 LRATO95237 230 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GADD45GO95257 159 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 BMP15O95972 392 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 TFAP2AP05549 437 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PAEPP09466 180 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CSF3P09919 207 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 SLC35G4P0C7Q5 338 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR56A5P0C7T3 313 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 EPCAMP16422 314 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 UGT2B7P16662 529 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 HIST1H1TP22492 207 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RPS12P25398 132 aaKnown RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GCAP28676 217 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PCSK6P29122 969 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ADORA2BP29275 332 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 EPHA3P29320 983 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GABRA5P31644 462 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 NBL1P41271 181 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 TNFSF9P41273 254 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CX3CR1P49238 355 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 STC1P52823 247 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CDH12P55289 794 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FOXG1P55316 489 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 TCTAP57738 103 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 NCALDP61601 193 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RPS15AP62244 130 aaKnown RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CDK3Q00526 305 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 INCA1Q0VD86 236 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GAGE5Q13069 117 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 GAGE6Q13070 117 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 MAD2L1Q13257 205 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OR2F1Q13607 317 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 NFATC4Q14934 902 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 FCN2Q15485 313 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 CDKN3Q16667 212 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ISXQ2M1V0 245 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 PARP15Q460N3 678 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 ZFP69Q49AA0 526 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM97Q5BJF2 176 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 C6orf52Q5T4I8 152 aa3.19□□□□□ -1.9
SF3B1-203ENST00000414174 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms