RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 AIG1Q9NVV5 245 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 CLCF1Q9UBD9 225 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 GINS2Q9Y248 185 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 HEY1Q9Y5J3 304 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 PUS1Q9Y606 427 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 A0A0G2JLM5 398 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 FAM231BA6NCW3 169 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ARGFXA6NJG6 315 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 F8VP50 259 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF701M0R085 212 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CDC7O00311 574 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 PPP1R2P9O14990 202 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 STX10O60499 249 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 EIF3GO75821 320 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CCNB2O95067 398 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 NSA2O95478 260 aaKnown RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 SNAI1O95863 264 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 HSPB1P04792 205 aaKnown RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 EIF2S2P20042 333 aaKnown RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC2A5P22732 501 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CCNE1P24864 410 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CRABP2P29373 138 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 VDAC2P45880 294 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CSNK1DP48730 415 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CDC34P49427 236 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CRISP1P54107 249 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 UGT2B15P54855 530 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 DIO3P55073 304 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTBP60709 375 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTA2P62736 377 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTG1P63261 375 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTG2P63267 376 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTC1P68032 377 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTA1P68133 377 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 C2orf54Q08AI8 447 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 PGGHGQ32M88 737 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 GPR157Q5UAW9 335 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ADNP2Q6IQ32 1131 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ANKRD26P1Q6NSI1 321 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF774Q6NX45 483 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 COPS6Q7L5N1 327 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 BHLHA15Q7RTS1 189 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 HDDC2Q7Z4H3 204 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 LINC00523Q86TU6 105 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 LRRC8AQ8IWT6 810 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 FBXO16Q8IX29 292 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CMTM1Q8IZ96 169 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 EID2Q8N6I1 236 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 TTC29Q8NA56 475 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 HSD17B11Q8NBQ5 300 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR52E5Q8NH55 327 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 OPALINQ96PE5 141 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 RARRES2Q99969 163 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 IL22Q9GZX6 179 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 DEFB127Q9H1M4 99 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 PTGES2Q9H7Z7 377 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 MS4A12Q9NXJ0 267 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 CD274Q9NZQ7 290 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 XCL2Q9UBD3 114 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF107Q9UII5 783 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 ASF1AQ9Y294 204 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 POFUT2Q9Y2G5 429 aa3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 SAMHD1Q9Y3Z3 626 aaKnown RBP3.56□□□□□ -1.84
HMGB1P13-201ENST00000406019 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 USP27XA6NNY8 438 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 BIRC5O15392 142 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CALUO43852 315 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 AIREO43918 545 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 VAMP5O95183 116 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CLIC3O95833 236 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 FABP1P07148 127 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 UBCP0CG48 685 aaKnown RBP3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 STAG3L2P0CL84 134 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ICAM2P13598 275 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 BTCP35070 178 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CRATP43155 626 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ADARB1P78563 741 aaKnown RBP3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF92Q03936 586 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 RAD51Q06609 339 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 NAB1Q13506 487 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CAPRIN1Q14444 709 aaKnown RBP3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CYTH1Q15438 398 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 EOGTQ5NDL2 527 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 C6orf183Q5T699 404 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CLEC6AQ6EIG7 209 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC25A25Q6KCM7 469 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF620Q6ZNG0 422 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 FAM122BQ7Z309 247 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 VTCN1Q7Z7D3 282 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 P2RY8Q86VZ1 359 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 APRG1Q8IVJ8 170 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF100Q8IYN0 542 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR9G1Q8NH87 305 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC7A13Q8TCU3 470 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CXorf40AQ8TE69 158 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 DTD1Q8TEA8 209 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 TMEM54Q969K7 222 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms