RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 CATR1Q13166 79 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SLC14A1Q13336 389 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 MFAP5Q13361 173 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SMAD2Q15796 467 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 VHLLQ6RSH7 139 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 GFRALQ6UXV0 394 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SLAMF9Q96A28 289 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 CNTNAP3Q9BZ76 1288 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 HRH4Q9H3N8 390 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 CHST11Q9NPF2 352 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 GREB1LQ9C091 1923 aaPredicted RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 CCDC163A0A0D9SF12 145 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 EIF4EP06730 217 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 CYC1P08574 325 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SPI1P17947 270 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 BLVRBP30043 206 aaPredicted RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 TIGD3Q6B0B8 471 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 NTN4Q9HB63 628 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 CACFD1Q9UGQ2 172 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 CHST2Q9Y4C5 530 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 S100A11P31949 105 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 RAD52P43351 418 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 RAE1P78406 368 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 ANKRD34AQ69YU3 496 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 OR5H6Q8NGV6 325 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 HSD17B8Q92506 261 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 HAS2Q92819 552 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SLC35B4Q969S0 331 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 Q96M85 177 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 CSF3RQ99062 836 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 LRRC61Q9BV99 259 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 HINT3Q9NQE9 182 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 FAM212BQ9NTI7 297 aaPredicted RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 IGLV3-16A0A075B6K0 115 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 FRG2CA6NGY1 282 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 H0Y8X5 98 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 UPK1AO00322 258 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 C1QBP02746 253 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 CCR2P41597 374 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 MDGA2Q7Z553 956 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 PXT1Q8NFP0 134 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 GABRG3Q99928 467 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 PDCD1LG2Q9BQ51 273 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SCPEP1Q9HB40 452 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 EXOSC3Q9NQT5 275 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 PIGLQ9Y2B2 252 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 COA3Q9Y2R0 106 aaPredicted RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 POLDIP2Q9Y2S7 368 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 FBXW12Q6X9E4 464 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 FAM173AQ9BQD7 235 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SPACA1Q9HBV2 294 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 DOCK6Q96HP0 2047 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 TPRP12270 2363 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 C21orf140B9A014 251 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 ZNF254O75437 659 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 MT-CO3P00414 261 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 RPS18P62269 152 aaKnown RBP10.01□□□□□ -0.81
MDC1-201ENST00000376406 ALKAL2Q6UX46 152 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 SYS1Q8N2H4 156 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 OR4D6Q8NGJ1 314 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 OR52H1Q8NGJ2 320 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 OR51A2Q8NGJ7 313 aa10.01□□□□□ -0.81
MDC1-201ENST00000376406 AIPO00170 330 aa10□□□□□ -0.81
MDC1-201ENST00000376406 TMEM127O75204 238 aa10□□□□□ -0.81
MDC1-201ENST00000376406 CEACAM5P06731 702 aa10□□□□□ -0.81
MDC1-201ENST00000376406 ALDH3B1P43353 468 aa10□□□□□ -0.81
MDC1-201ENST00000376406 MYBPHQ13203 477 aa10□□□□□ -0.81
MDC1-201ENST00000376406 USP51Q70EK9 711 aa10□□□□□ -0.81
MDC1-201ENST00000376406 TECTBQ96PL2 329 aa10□□□□□ -0.81
MDC1-201ENST00000376406 DUSP15Q9H1R2 295 aaPredicted RBP10□□□□□ -0.81
MDC1-201ENST00000376406 S1PR5Q9H228 398 aa10□□□□□ -0.81
MDC1-201ENST00000376406 PLAC1Q9HBJ0 212 aa10□□□□□ -0.81
MDC1-201ENST00000376406 BIN3Q9NQY0 253 aa10□□□□□ -0.81
MDC1-201ENST00000376406 SLC23A2Q9UGH3 650 aa10□□□□□ -0.81
MDC1-201ENST00000376406 A8MXE2 369 aa10□□□□□ -0.81
MDC1-201ENST00000376406 PNLIPP16233 465 aa10□□□□□ -0.81
MDC1-201ENST00000376406 HSF1Q00613 529 aa10□□□□□ -0.81
MDC1-201ENST00000376406 RNPS1Q15287 305 aaKnown RBP10□□□□□ -0.81
MDC1-201ENST00000376406 GLYR1Q49A26 553 aaPredicted RBP10□□□□□ -0.81
MDC1-201ENST00000376406 CPNE4Q96A23 557 aaPredicted RBP10□□□□□ -0.81
MDC1-201ENST00000376406 SMIM19Q96E16 107 aa10□□□□□ -0.81
MDC1-201ENST00000376406 HINT2Q9BX68 163 aa10□□□□□ -0.81
MDC1-201ENST00000376406 FAM186AA6NE01 2351 aa10□□□□□ -0.81
MDC1-201ENST00000376406 POM121CA8CG34 1229 aa10□□□□□ -0.81
MDC1-201ENST00000376406 OR8B8Q15620 311 aa10□□□□□ -0.81
MDC1-201ENST00000376406 DOK3Q7L591 496 aa10□□□□□ -0.81
MDC1-201ENST00000376406 NAXDQ8IW45 347 aa10□□□□□ -0.81
MDC1-201ENST00000376406 SLC7A6Q92536 515 aa10□□□□□ -0.81
MDC1-201ENST00000376406 DVL3Q92997 716 aaPredicted RBP10□□□□□ -0.81
MDC1-201ENST00000376406 KCNJ15Q99712 375 aa10□□□□□ -0.81
MDC1-201ENST00000376406 FBXL2Q9UKC9 423 aa10□□□□□ -0.81
MDC1-201ENST00000376406 FBXO7Q9Y3I1 522 aa10□□□□□ -0.81
MDC1-201ENST00000376406 LCTP09848 1927 aa10□□□□□ -0.81
MDC1-201ENST00000376406 DIO1P49895 249 aa10□□□□□ -0.81
MDC1-201ENST00000376406 FABP5Q01469 135 aa10□□□□□ -0.81
MDC1-201ENST00000376406 CLN3Q13286 438 aa10□□□□□ -0.81
MDC1-201ENST00000376406 PAQR6Q6TCH4 344 aa10□□□□□ -0.81
MDC1-201ENST00000376406 PRSS45Q7RTY3 260 aa10□□□□□ -0.81
MDC1-201ENST00000376406 SLC51BQ86UW2 128 aa10□□□□□ -0.81
MDC1-201ENST00000376406 WDR5BQ86VZ2 330 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms