RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 OR10P1Q8NGE3 313 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 NEIL2Q969S2 332 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 YIPF1Q9Y548 306 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 SLCO1B1Q9Y6L6 691 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 C17orf105B2RV13 164 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 OR1D4P47884 311 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 SSBP1Q04837 148 aaKnown RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ZP2Q05996 745 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 DOC2BQ14184 412 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 FAM209BQ5JX69 171 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 OR4A47Q6IF82 309 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 RSRP1Q9BUV0 290 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 FER1L5A0AVI2 2057 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CIB3Q96Q77 187 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-201ENST00000371817 TMEM218A2RU14 115 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 PIPP12273 146 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-201ENST00000371817 GP2P55259 537 aaKnown RBP14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CDC20BQ86Y33 519 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 NAXDQ8IW45 347 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 ZNF383Q8NA42 475 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 NMNAT3Q96T66 252 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 AKIP1Q9NQ31 210 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 SPCS3P61009 180 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 FANCMQ8IYD8 2048 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 FCN1O00602 326 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 MAP2K6P52564 334 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 TFAP2EQ6VUC0 442 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 LYG2Q86SG7 212 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 RNF167Q9H6Y7 350 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 FOXE1O00358 373 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-201ENST00000371817 SPINT2O43291 252 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CTSLP07711 333 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CTXN2P0C2S0 81 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 MEOX1P50221 254 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 YOD1Q5VVQ6 348 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-201ENST00000371817 GNB4Q9HAV0 340 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CLDN34H7C241 214 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 LPAR4Q99677 370 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CORINQ9Y5Q5 1042 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 KIR2DS1A0A191URI9 304 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 OR5K3A6NET4 321 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 KIR2DS4P43632 304 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 CASP6P55212 293 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 KIR2DS1Q14954 304 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 SLC35D3Q5M8T2 416 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 DPY19L2P2Q6ZN68 376 aa14.05□□□□□ -0.16
COL5A1-201ENST00000371817 AHCTF1Q8WYP5 2266 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 C11orf87Q6NUJ2 197 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 USP50Q70EL3 339 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-201ENST00000371817 GPR32P1Q8NGA4 272 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 hCG_1809904A0A1W2PP81 198 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 A0A1W2PR64 198 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 A0A1W2PRV1 198 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 ZNF732B4DXR9 585 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 HAPLN1P10915 354 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-201ENST00000371817 SLC6A12P48065 614 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 DTD1Q8TEA8 209 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 EMG1Q92979 244 aaKnown RBP14.04□□□□□ -0.16
COL5A1-201ENST00000371817 PISDQ9UG56 409 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 GLB1P16278 677 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 TBPL2Q6SJ96 375 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 GLCEO94923 617 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 OPN1MWP04001 364 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 OPN1MW2P0DN77 364 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 OPN1MW3P0DN78 364 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 HRH1P35367 487 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 ATP6V1FQ16864 119 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 DNMT3BQ9UBC3 853 aaKnown RBP14.04□□□□□ -0.16
COL5A1-201ENST00000371817 DEDDO75618 318 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 FBP1P09467 338 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 PLXDC1Q8IUK5 500 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 C2orf50Q96LR7 162 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 WDR92Q96MX6 357 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 MAP1LC3CQ9BXW4 147 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 GFRA2O00451 464 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 TOX3O15405 576 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-201ENST00000371817 OR2M3Q8NG83 312 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 PIGLQ9Y2B2 252 aa14.04□□□□□ -0.16
COL5A1-201ENST00000371817 TMEM127O75204 238 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 IL3RAP26951 378 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 OR10J1P30954 320 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 ULBP2Q9BZM5 246 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 NXPH2O95156 264 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 POU3F3P20264 500 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-201ENST00000371817 PJVKQ0ZLH3 352 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CYHR1Q6ZMK1 362 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 NPWQ8N729 165 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 ADOQ96SZ5 270 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 KIAA1217Q5T5P2 1943 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 MMP15P51511 669 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 OR51H1Q8NH63 302 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CPPED1Q9BRF8 314 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CHST2Q9Y4C5 530 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 A0A1W2PPE2 198 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 RPA2P15927 270 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 FIGLAQ6QHK4 219 aa14.03□□□□□ -0.16
COL5A1-201ENST00000371817 CISD2Q8N5K1 135 aaKnown RBP14.03□□□□□ -0.16
COL5A1-201ENST00000371817 SNX22Q96L94 193 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms