RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SDHCQ99643 169 aaPredicted RBP15.8■□□□□ 0.12
RAB39A-201ENST00000320578 MRI1Q9BV20 369 aa15.8■□□□□ 0.12
RAB39A-201ENST00000320578 NELFAQ9H3P2 528 aa15.8■□□□□ 0.12
RAB39A-201ENST00000320578 RNF122Q9H9V4 155 aa15.8■□□□□ 0.12
RAB39A-201ENST00000320578 FREM3P0C091 2139 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 A0A1B0GTH9 108 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 A0A1B0GVG6 124 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 FABP12A6NFH5 140 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 FAM166BA8MTA8 275 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 CELA3AP09093 270 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 SELENOPP49908 381 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 ZNF84P51523 738 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 CCL11P51671 97 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 RIPPLY2Q5TAB7 128 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 LYSMD2Q8IV50 215 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 ABTB1Q969K4 478 aaPredicted RBP15.79■□□□□ 0.12
RAB39A-201ENST00000320578 MOB1AQ9H8S9 216 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 G6PC2Q9NQR9 355 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 CDV3Q9UKY7 258 aaKnown RBP15.79■□□□□ 0.12
RAB39A-201ENST00000320578 NCKAP5O14513 1909 aa15.79■□□□□ 0.12
RAB39A-201ENST00000320578 ACOD1A6NK06 481 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ZNF878C9JN71 531 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 WNT11O96014 354 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 CTSSP25774 331 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 OR10A3P58181 314 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 MRPS34P82930 218 aaKnown RBP15.78■□□□□ 0.12
RAB39A-201ENST00000320578 OXA1LQ15070 435 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 STK11Q15831 433 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 KLHL24Q6TFL4 600 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 DCDC5Q6ZRR9 648 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.78■□□□□ 0.12
RAB39A-201ENST00000320578 LRRC28Q86X40 367 aaPredicted RBP15.78■□□□□ 0.12
RAB39A-201ENST00000320578 FDCSPQ8NFU4 85 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 OR10S1Q8NGN2 331 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ROBO4Q8WZ75 1007 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 SRRQ9GZT4 340 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ZDHHC11Q9H8X9 412 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 B3GAT2Q9NPZ5 323 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 OR52A1Q9UKL2 312 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 POLR1DQ9Y2S0 133 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 RIF1Q5UIP0 2472 aaKnown RBP15.78■□□□□ 0.12
RAB39A-201ENST00000320578 MED12Q93074 2177 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 TTLL8A6PVC2 850 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 TBX1O43435 398 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 NPR2P20594 1047 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ACHEP22303 614 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 CDAP32320 146 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 RFC3P40938 356 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 HIST1H3AP68431 136 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 MFGE8Q08431 387 aaPredicted RBP15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ZNF79Q15937 498 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 PHYHD1Q5SRE7 291 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 HIST2H3PS2Q5TEC6 136 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 TMEM244Q5VVB8 128 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 HIST2H3AQ71DI3 136 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 AAED1Q7RTV5 226 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 CPT1CQ8TCG5 803 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 NABP1Q96AH0 204 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ULBP2Q9BZM5 246 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 SLC6A15Q9H2J7 730 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 TCF7L1Q9HCS4 588 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 EMC7Q9NPA0 242 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 CENPMQ9NSP4 180 aa15.78■□□□□ 0.12
RAB39A-201ENST00000320578 ZFHX2Q9C0A1 2572 aaPredicted RBP15.77■□□□□ 0.12
RAB39A-201ENST00000320578 TMEM269A0A1B0GVZ9 245 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 A0A1W2PPK0 400 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 HPGDSO60760 199 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 SYNGR4O95473 234 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 UBCP0CG48 685 aaKnown RBP15.77■□□□□ 0.11
RAB39A-201ENST00000320578 CFPP27918 469 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 CORO6Q6QEF8 472 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 FAM131AQ6UXB0 335 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 STAC2Q6ZMT1 411 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 SPATC1Q76KD6 591 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 CENPSQ8N2Z9 138 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 ABCB10Q9NRK6 738 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 CYSLTR2Q9NS75 346 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 FAM206AQ9NX38 181 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 DAPK2Q9UIK4 370 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 MCTS1Q9ULC4 181 aaKnown RBP15.77■□□□□ 0.11
RAB39A-201ENST00000320578 SLC22A13Q9Y226 551 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 EMC9Q9Y3B6 208 aa15.77■□□□□ 0.11
RAB39A-201ENST00000320578 CNOT1A5YKK6 2376 aaKnown RBP15.77■□□□□ 0.11
RAB39A-201ENST00000320578 KIAA1549Q9HCM3 1950 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 A0A087WV48 116 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 TRAV17A0A0B4J275 112 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 AIPO00170 330 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 CPN1P15169 458 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 GRB2P62993 217 aaKnown RBP15.76■□□□□ 0.11
RAB39A-201ENST00000320578 SLC25A35Q3KQZ1 300 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 FAM27BQ5VT28 67 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 STEAP3Q658P3 488 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 CNIH2Q6PI25 160 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 CFAP77Q6ZQR2 320 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 LRRTM1Q86UE6 522 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 GJC3Q8NFK1 279 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 TMEM106AQ96A25 262 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 ZNF845Q96IR2 970 aaPredicted RBP15.76■□□□□ 0.11
RAB39A-201ENST00000320578 COX4I2Q96KJ9 171 aa15.76■□□□□ 0.11
RAB39A-201ENST00000320578 SMAD5Q99717 465 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms