RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 MARS2Q96GW9 593 aaKnown RBP13.93□□□□□ -0.18
LSM1-201ENST00000311351 CLPTM1LQ96KA5 538 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 BTBD10Q9BSF8 475 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 IFT27Q9BW83 186 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 OR2J1Q9GZK6 312 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 FN3KQ9H479 309 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 VNN3Q9NY84 501 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 ASH2LQ9UBL3 628 aa13.93□□□□□ -0.18
LSM1-201ENST00000311351 TNFRSF11BO00300 401 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 SGCEO43556 437 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 IGHV3-13P01766 116 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 TACSTD2P09758 323 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 GAAP10253 952 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 HIST1H1CP16403 213 aaKnown RBP13.92□□□□□ -0.18
LSM1-201ENST00000311351 IGFBP5P24593 272 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 MAGEA2P43356 314 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 PPP1CBP62140 327 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 CCL8P80075 99 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 AQP6Q13520 282 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 CCNIQ14094 377 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 MEP1BQ16820 701 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 MTX3Q5HYI7 312 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 C1orf94Q6P1W5 598 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 LEG1Q6P5S2 330 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 TMEM154Q6P9G4 183 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
LSM1-201ENST00000311351 JAZF1Q86VZ6 243 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 DHFR2Q86XF0 187 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 HIPK1Q86Z02 1210 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 GLB1L2Q8IW92 636 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 ARHGAP24Q8N264 748 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 OR4C15Q8NGM1 316 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 OR4K13Q8NH42 304 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 GNPDA2Q8TDQ7 276 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 SLC7A6Q92536 515 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 RDH5Q92781 318 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 NMNAT3Q96T66 252 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 MUC13Q9H3R2 512 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 POFUT1Q9H488 388 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 NARFLQ9H6Q4 476 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 EGLN3Q9H6Z9 239 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 CHODLQ9H9P2 273 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 SLCO1C1Q9NYB5 712 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 NDRG4Q9ULP0 352 aaKnown RBP13.92□□□□□ -0.18
LSM1-201ENST00000311351 POLR1DQ9Y2S0 133 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 DNHD1Q96M86 4753 aa13.92□□□□□ -0.18
LSM1-201ENST00000311351 IGLV1-36A0A0B4J1U3 117 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 LOC100289279A0A1B0GTE1 492 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 ICMTO60725 284 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 RP2O75695 350 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 ABHD16AO95870 558 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 ACHEP22303 614 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 GCH1P30793 250 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 IFNGR2P38484 337 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 CENPAP49450 140 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 CHN2P52757 468 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 TSPAN31Q12999 210 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 TRIM25Q14258 630 aaKnown RBP13.91□□□□□ -0.18
LSM1-201ENST00000311351 ZNF718Q3SXZ3 478 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 CLEC12AQ5QGZ9 265 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 SDR9C7Q8NEX9 313 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 KLF14Q8TD94 323 aaPredicted RBP13.91□□□□□ -0.18
LSM1-201ENST00000311351 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 C4orf45Q96LM5 186 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 ZNF275Q9NSD4 429 aaPredicted RBP13.91□□□□□ -0.18
LSM1-201ENST00000311351 PLEK2Q9NYT0 353 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 TAS2R1Q9NYW7 299 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 GPR160Q9UJ42 338 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 PRPF19Q9UMS4 504 aaKnown RBP13.91□□□□□ -0.18
LSM1-201ENST00000311351 CDH10Q9Y6N8 788 aa13.91□□□□□ -0.18
LSM1-201ENST00000311351 CUBNO60494 3623 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 ZSCAN5BA6NJL1 495 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 ARPC3O15145 178 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 RER1O15258 196 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 LMX1BO60663 402 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 CDC14BO60729 498 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 KRT36O76013 467 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 RENP00797 406 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 COX5BP10606 129 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 GPR6P46095 362 aaPredicted RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 MMP15P51511 669 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 LSM6P62312 80 aaKnown RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 TSTQ16762 297 aaKnown RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 CHRFAM7AQ494W8 412 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 CCDC92Q53HC0 331 aaPredicted RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 SLC35F1Q5T1Q4 408 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 ZNF770Q6IQ21 691 aaPredicted RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 FAM166AQ6J272 317 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 DNM1P34Q6PK57 102 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 UNQ6126/PRO20091Q6UXV3 157 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 IL17RELQ6ZVW7 336 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 OR6V1Q8N148 313 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 WACQ9BTA9 647 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 PLA2G12AQ9BZM1 189 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 MAGIXQ9H6Y5 334 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 SRA1Q9HD15 236 aaKnown RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 RPRD1BQ9NQG5 326 aaKnown RBP13.9□□□□□ -0.18
LSM1-201ENST00000311351 KCNS2Q9ULS6 477 aa13.9□□□□□ -0.18
LSM1-201ENST00000311351 B9D1Q9UPM9 204 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms