RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CLEC12AQ5QGZ9 265 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 METTL11BQ5VVY1 283 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 FAM205BPQ63HN1 556 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GPR139Q6DWJ6 353 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 RHBDD2Q6NTF9 364 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 FAM180BQ6P0A1 224 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PLBD1Q6P4A8 553 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ARHGAP11AQ6P4F7 1023 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 KIRREL2Q6UWL6 708 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF836Q6ZNA1 936 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 RTL4Q6ZR62 310 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CEACAM19Q7Z692 300 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 FJX1Q86VR8 437 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PAQR7Q86WK9 346 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 NR2C2APQ86WQ0 139 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GRAMD2AQ8IUY3 354 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR6V1Q8N148 313 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF619Q8N2I2 560 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TOMM5Q8N4H5 51 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SPICQ8N5J4 248 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TMEM99Q8N816 258 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZFP41Q8N8Y5 198 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 AMER3Q8N944 861 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SPERTQ8NA61 448 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 UXS1Q8NBZ7 420 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF680Q8NEM1 530 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 BBS1Q8NFJ9 593 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR2L3Q8NG85 312 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR4K14Q8NGD5 310 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR8H1Q8NGG4 311 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR52E1Q8NGJ3 308 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR51G2Q8NGK0 314 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR2Y1Q8NGV0 311 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR2T27Q8NH04 317 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TRMT10AQ8TBZ6 339 aaKnown RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 FANK1Q8TC84 345 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 RPS4Y2Q8TD47 263 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TMEM255BQ8WV15 326 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SMIM4Q8WVI0 70 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TMEM239Q8WW34 195 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZFPM2Q8WW38 1151 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ITLN2Q8WWU7 325 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OIT3Q8WWZ8 545 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ASB13Q8WXK3 278 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SLC22A18Q96BI1 424 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 RBM18Q96H35 190 aaKnown RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SMIM10Q96HG1 83 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 LURAP1Q96LR2 239 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SERINC2Q96SA4 455 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ABHD1Q96SE0 405 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SDF2Q99470 211 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PRSS27Q9BQR3 290 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CACNG6Q9BXT2 260 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 BEX2Q9BXY8 128 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 KLHL31Q9H511 634 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 HEXA-AS1Q9H8Q6 139 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 C12orf10Q9HB07 376 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 LYRM4Q9HD34 91 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GLTPQ9NZD2 209 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR6C2Q9NZP2 312 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 MALT1Q9UDY8 824 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SERTAD3Q9UJW9 196 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 FBXL4Q9UKA2 621 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SLC7A7Q9UM01 511 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ICAM5Q9UMF0 924 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SIGLEC7Q9Y286 467 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 HS3ST3B1Q9Y662 390 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SIRT4Q9Y6E7 314 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 KCNE3Q9Y6H6 103 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 COLEC10Q9Y6Z7 277 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ARHGAP21Q5T5U3 1957 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CUBNO60494 3623 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1B0GUH1 482 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CDHR4A6H8M9 788 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SNRPGP15A8MWD9 76 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 C4orf51C9J302 202 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 C9J4A7 227 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CDC42EP2O14613 210 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 GPR171O14626 319 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 EEF1E1O43324 174 aaKnown RBP4.37□□□□□ -1.71
CKS1B-201ENST00000308987 LANCL1O43813 399 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 FCMRO60667 390 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NCR1O76036 304 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ONECUT2O95948 504 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CH25HO95992 272 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 IGF2P01344 180 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 IL5P05113 134 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 IFI30P13284 250 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CPMP14384 443 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CPN1P15169 458 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF3P17036 446 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 NT5EP21589 574 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 DRD5P21918 477 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 DNASE1P24855 282 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 MST1P26927 711 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 CERS1P27544 350 aa4.37□□□□□ -1.71
CKS1B-201ENST00000308987 SLC6A6P31641 620 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms