RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OR2M5A3KFT3 312 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 OR6C65A6NJZ3 312 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 H3BUI4 141 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 EIF1AYO14602 144 aaKnown RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 PHYHO14832 338 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 AHSA1O95433 338 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MT-ATP6P00846 226 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 SRFP11831 508 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 SPOCK1Q08629 439 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM225Q6GV28 225 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 LRFN4Q6PJG9 635 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 NUP54Q7Z3B4 507 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 COQ8AQ8NI60 647 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MVB12AQ96EY5 273 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 DMRTA2Q96SC8 542 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MED29Q9NX70 200 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 A0A1W2PQD3 144 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MCRIP1C9JLW8 97 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 TO15178 435 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 OPN1LWP04000 364 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 GIPP09681 153 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MNDAP41218 407 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 RIDAP52758 137 aaKnown RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 PNLIPRP2P54317 469 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 OR7A5Q15622 319 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 SMAD2Q15796 467 aaKnown RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 TEX30Q5JUR7 227 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 DNM1P46Q6ZS02 220 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF627Q7L945 461 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 GRINAQ7Z429 371 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 PLXDC1Q8IUK5 500 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 SPICQ8N5J4 248 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MARC2Q969Z3 335 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 CHRNA10Q9GZZ6 450 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 GPN1Q9HCN4 374 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 SLC22A11Q9NSA0 550 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 VSX1Q9NZR4 365 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 MED11Q9P086 117 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 ATXN7L1Q9ULK2 861 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-204ENST00000300862 SESN1Q9Y6P5 492 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 LOC100289279A0A1B0GTE1 492 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 A0A1B0GX78 115 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 SLC17A2O00624 439 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 ADAM10O14672 748 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 PRKACAP17612 351 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 BCKDHBP21953 392 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 NFYAP23511 347 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 PRSS3P35030 304 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 ARRB1P49407 418 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 H2BFSP57053 126 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 HLXQ14774 488 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 SLC25A45Q8N413 288 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 D2HGDHQ8N465 521 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF441Q8N8Z8 693 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 OIT3Q8WWZ8 545 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 ASB17Q8WXJ9 295 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 SLC25A44Q96H78 314 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 IER2Q9BTL4 223 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 RAB33BQ9H082 229 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 LDAHQ9H6V9 325 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 HRH3Q9Y5N1 445 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 MRPS18BQ9Y676 258 aaKnown RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 KRBOX1C9JBD0 128 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 SMAD9O15198 467 aaKnown RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 NDUFA2O43678 99 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 DUX1O43812 170 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM127O75204 238 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 FGF2P09038 288 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 EIF1AXP47813 144 aaKnown RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 RNF4P78317 190 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 GLO1Q04760 184 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 DCAF12L2Q5VW00 463 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 FDX2Q6P4F2 183 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 KCTD18Q6PI47 426 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 SLC36A1Q7Z2H8 476 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 DCXRQ7Z4W1 244 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 MUC20Q8N307 709 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-204ENST00000300862 JAGN1Q8N5M9 183 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 NKD1Q969G9 470 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 EMC6Q9BV81 110 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 CENPMQ9NSP4 180 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 SUSD2Q9UGT4 822 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 NUP210LQ5VU65 1888 aa11.56□□□□□ -0.56
HIF3A-204ENST00000300862 MS4A18H0YCH9 400 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 H3BML4 177 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 M0QYG6 137 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 CPN1P15169 458 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 C4BPBP20851 252 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 FAUP35544 74 aaKnown RBP11.55□□□□□ -0.56
HIF3A-204ENST00000300862 SLC26A5P58743 744 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 ROM1Q03395 351 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 RIPPLY1Q0D2K3 151 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 MS4A18Q3C1V0 323 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 CATSPERDQ86XM0 798 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 SLC38A9Q8NBW4 561 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 OR52N5Q8NH56 324 aa11.55□□□□□ -0.56
HIF3A-204ENST00000300862 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms