RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PPIAL4EA0A075B759 164 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 PPIAL4CA0A0B4J2A2 164 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 ISPDA4D126 451 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 DNAJC9-AS1A6NH13 148 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 A8MXK9 166 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 PPIAL4DF5H284 164 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 CDC42EP2O14613 210 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 TPD52L2O43399 206 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 PTHP01270 115 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 PPIAL4FP0DN26 164 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 HKR1P10072 659 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 ZNF12P17014 697 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 DRD4P21917 467 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 YAP1P46937 504 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 LIMS1P48059 325 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 GDI2P50395 445 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 RPL27P61353 136 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 HOXA4Q00056 320 aaPredicted RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 TEKQ02763 1124 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 ALG10Q5BKT4 473 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 MESTQ5EB52 335 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 DOK3Q7L591 496 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 VTCN1Q7Z7D3 282 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 JAZF1Q86VZ6 243 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 OR8J3Q8NGG0 315 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 OR13C2Q8NGS9 318 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 SGMS2Q8NHU3 365 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 C10orf82Q8WW14 230 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 RAB1CQ92928 201 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 ZMYND19Q96E35 227 aaPredicted RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 C4orf45Q96LM5 186 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 DCLRE1CQ96SD1 692 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 ALG12Q9BV10 488 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 ZNF747Q9BV97 191 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 RABEP2Q9H5N1 569 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 PATZ1Q9HBE1 687 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 CCNB1IP1Q9NPC3 277 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 POLE4Q9NR33 117 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 TMEM106BQ9NUM4 274 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 RHCGQ9UBD6 479 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 EGFL7Q9UHF1 273 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 PURGQ9UJV8 347 aaKnown RBP7.52□□□□□ -1.21
TPM3-201ENST00000271850 ADAM18Q9Y3Q7 739 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 INSIG2Q9Y5U4 225 aa7.52□□□□□ -1.21
TPM3-201ENST00000271850 A0A0G2JND7 137 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 ENTPD5O75356 428 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 MT-ND5P03915 603 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 IGHV4-38-2P0DP08 117 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 THRBP10828 461 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 IFI30P13284 250 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 CTLA4P16410 223 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 KITLGP21583 273 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 ANOS1P23352 680 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 GATA3P23771 443 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 GCH1P30793 250 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 SLC6A9P48067 706 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 FXYD6P3P58550 94 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 CTXN1P60606 82 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 TNFAIP6P98066 277 aaPredicted RBP7.51□□□□□ -1.21
TPM3-201ENST00000271850 SF3A3Q12874 501 aaKnown RBP eCLIP7.51□□□□□ -1.21
TPM3-201ENST00000271850 ZNF154Q13106 437 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 CYBRD1Q53TN4 286 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 MTX3Q5HYI7 312 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 INTS11Q5TA45 600 aaKnown RBP7.51□□□□□ -1.21
TPM3-201ENST00000271850 TBPL2Q6SJ96 375 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 FAM122BQ7Z309 247 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 LRRC28Q86X40 367 aaPredicted RBP7.51□□□□□ -1.21
TPM3-201ENST00000271850 NRMQ8IXM6 262 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 BPIFB2Q8N4F0 458 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 OR51A7Q8NH64 312 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 SLC26A7Q8TE54 656 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 ITLN1Q8WWA0 313 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 RASSF5Q8WWW0 418 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 BPIFA2Q96DR5 249 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 TIMD4Q96H15 378 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 PRRC1Q96M27 445 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 MAGEB18Q96M61 343 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 TMEM120AQ9BXJ8 343 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 POLR2J2Q9GZM3 115 aaKnown RBP7.51□□□□□ -1.21
TPM3-201ENST00000271850 POLR2J3Q9H1A7 115 aaKnown RBP7.51□□□□□ -1.21
TPM3-201ENST00000271850 LRMDAQ9H2I8 198 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 INTS9Q9NV88 658 aaKnown RBP7.51□□□□□ -1.21
TPM3-201ENST00000271850 CMTM6Q9NX76 183 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 STARD10Q9Y365 291 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 MED31Q9Y3C7 131 aa7.51□□□□□ -1.21
TPM3-201ENST00000271850 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 IGHV3OR16-10A0A075B7F0 116 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 A0A087WUU8 490 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 MDFIC2A0A1B0GVS7 189 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 A0A1W2PPL8 197 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 OR6C6A6NF89 314 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 CEACAM18A8MTB9 384 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 FAM220BPB1ANY3 271 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 H0YL77 283 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 H3BSA7 217 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 ZNF205O95201 554 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 GPANK1O95872 356 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 DBHP09172 617 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 SBK2P0C263 348 aa7.5□□□□□ -1.21
TPM3-201ENST00000271850 SELEP16581 610 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms