RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 WNK3Q9BYP7 1800 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 OR10Z1Q8NGY1 313 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 RASD2Q96D21 266 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 ITGB8P26012 769 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 SYT9Q86SS6 491 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 TMEM178AQ8NBL3 297 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 SIX6O95475 246 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 HEXAP06865 529 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 CBR1P16152 277 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 ERVFC1P60507 584 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 THEM4Q5T1C6 240 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 Q6ZSR9 355 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 KLHDC1Q8N7A1 406 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 CALHM2Q9HA72 323 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 MTCH1Q9NZJ7 389 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 SELEP16581 610 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 FCN2Q15485 313 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 CPEB3Q8NE35 698 aaKnown RBP16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 DVL3Q92997 716 aaPredicted RBP16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 FAM234AQ9H0X4 552 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 FBXO8Q9NRD0 319 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 ACOT8O14734 319 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 TGOLN2O43493 480 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 EGR3Q06889 387 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 MFSD12Q6NUT3 480 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 SUMF1Q8NBK3 374 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 OR4C5Q8NGB2 326 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 KIR3DX1Q9H7L2 352 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 DUSP22Q9NRW4 184 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 M0QYG6 137 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 OR51S1Q8NGJ8 323 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 ARSGQ96EG1 525 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 IGLV3-10A0A075B6K4 115 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 DOK2O60496 412 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 ICMTO60725 284 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 CTNSO60931 367 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 CSF3P09919 207 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 GJA4P35212 333 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 RAB7AP51149 207 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 GDPD3Q7L5L3 318 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 PLK3Q9H4B4 646 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 NTN4Q9HB63 628 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 SIGLEC6O43699 453 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 TMEM11P17152 192 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 PTTG1IPP53801 180 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 VAMP3Q15836 100 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 TMEM64Q6YI46 380 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 V9GYS6 101 aa16.03■□□□□ 0.16
NOTCH3-201ENST00000263388 HSPB2A8KAH6 182 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF814B7Z6K7 855 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 B3GALNT1O75752 331 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 SOD1P00441 154 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 POLR2IP36954 125 aaKnown RBP16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 HSPB2Q16082 182 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 NDFIP1Q9BT67 221 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 GLAP06280 429 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 ADRB1P08588 477 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF85Q03923 595 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 FCRL6Q6DN72 434 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 H3F3CQ6NXT2 135 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 H2AFB1P0C5Y9 115 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 HCCSP53701 268 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 STT3BQ8TCJ2 826 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 C1QTNF3Q9BXJ4 246 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 MYO7BQ6PIF6 2116 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 PRAMEF25A6NGN4 478 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC6A11P48066 632 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 C1orf140Q5VVS0 124 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 TCTE3Q8IZS6 198 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 CSAG2Q9Y5P2 127 aa16.02■□□□□ 0.16
NOTCH3-201ENST00000263388 A0A1B0GX78 115 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 DOK3Q7L591 496 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 DEFB103AP81534 67 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 DMWDQ09019 674 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 ACOT7LQ6ZUV0 252 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 SLAMF7Q9NQ25 335 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 CLCF1Q9UBD9 225 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 CACFD1Q9UGQ2 172 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 LGALS8O00214 317 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 XRCC3O43542 346 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 SAXO2Q658L1 398 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 CHAC2Q8WUX2 184 aa16.02■□□□□ 0.15
NOTCH3-201ENST00000263388 PLPP1O14494 284 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 CNIH1O95406 144 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 ARHGAP11BQ3KRB8 267 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 TMEFF1Q8IYR6 380 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 SEH1LQ96EE3 360 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 KCND3Q9UK17 655 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 KPTNQ9Y664 436 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 SLC5A10A0PJK1 596 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 KLRC4-KLRK1H3BQV0 150 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 CALCRP30988 508 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 CSNK1G2P78368 415 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 BAMBIQ13145 260 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 ABHD17CQ6PCB6 329 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 GLIPR1L1Q6UWM5 242 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 EGLN1Q9GZT9 426 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms