RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FAM87AP0C7U9 286 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 KITLGP21583 273 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 SLC6A2P23975 617 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 SERPINA4P29622 427 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 OTX2P32243 289 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 ERVPABLB-1P60509 514 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 BTN3A2P78410 334 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 EGR4Q05215 589 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 VAMP3Q15836 100 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 WDR82Q6UXN9 313 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 MRGPRGQ86SM5 289 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 NIT1Q86X76 327 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 D2HGDHQ8N465 521 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 HJURPQ8NCD3 748 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 TSTD1Q8NFU3 115 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 OR5M3Q8NGP4 307 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 RNF125Q96EQ8 232 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 C12orf42Q96LP6 360 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 MS4A8Q9BY19 250 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 KATNBL1Q9H079 304 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 NELFAQ9H3P2 528 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 P2RX2Q9UBL9 471 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 YBX2Q9Y2T7 364 aaKnown RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 PCYT1BQ9Y5K3 369 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 NPIPA5A0A0B4J1W7 369 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 NPIPA5E9PKD4 350 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 NPIPA3F8WFD2 350 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 RNASEK-C17orf49H0YIS7 233 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 NME6O75414 186 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 TRGC1P0CF51 173 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 FGF5P12034 268 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 GPX2P18283 190 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 KDELR2P33947 212 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 RPL4P36578 427 aaKnown RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 DIO3P55073 304 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 OR4D2P58180 307 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 RAB30Q15771 203 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 TAZQ16635 292 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 MFSD14BQ5SR56 506 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 PODNL1Q6PEZ8 512 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 SLC16A9Q7RTY1 509 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 OR1J1Q8NGS3 322 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 SFXN5Q8TD22 340 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 SP7Q8TDD2 431 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 SLC6A18Q96N87 628 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 ORAI2Q96SN7 254 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 SIGMAR1Q99720 223 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 CPVLQ9H3G5 476 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM27Q9HBJ8 222 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 NPIPA1Q9UND3 350 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 HCFC2Q9Y5Z7 792 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 KANTRA0A1W2PQU2 76 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 HHLA1C9JL84 531 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 LRATO95237 230 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 OR2C1O95371 312 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 DDAH2O95865 285 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 SLC16A8O95907 504 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CDKN1AP38936 164 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 DCTP40126 519 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 OR12D2P58182 307 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 RAB1AP62820 205 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 RHEBQ15382 184 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 PRSS8Q16651 343 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 RAB6CQ53S08 254 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CTSL3PQ5NE16 218 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 LYPLAL1Q5VWZ2 237 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 FAM71E1Q6IPT2 247 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 OR52L1Q8NGH7 329 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 WDR89Q96FK6 387 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-201ENST00000258733 MRAP2Q96G30 205 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 RAX2Q96IS3 184 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CAPNS2Q96L46 248 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CHRDL1Q9BU40 450 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CIPCQ9C0C6 399 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 RAB6CQ9H0N0 254 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CWH43Q9H720 699 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 SERHLQ9NQF3 203 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 COL5A3P25940 1745 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-201ENST00000258733 H0Y980 276 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 APOC4-APOC2K7ER74 178 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 FXYD1O00168 92 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 CRYBB2P43320 205 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 MMDQ15546 238 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 TDRG1Q3Y452 100 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM225Q6GV28 225 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF730Q6ZMV8 503 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 Q6ZVH6 145 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 GRASPQ7Z6J2 395 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-201ENST00000258733 SMAP2Q8WU79 429 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-201ENST00000258733 UBE2FQ969M7 185 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF75AQ96N20 296 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 REEP2Q9BRK0 252 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 RBM22Q9NW64 420 aaKnown RBP eCLIP6.99□□□□□ -1.29
GPNMB-201ENST00000258733 MARCH5Q9NX47 278 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 MRPL15Q9P015 296 aaKnown RBP6.99□□□□□ -1.29
GPNMB-201ENST00000258733 JPT1Q9UK76 154 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 OSGIN2Q9Y236 505 aa6.99□□□□□ -1.29
GPNMB-201ENST00000258733 ELOVL7A1L3X0 281 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms