RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 PMPCAQ10713 525 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM225Q6GV28 225 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM17Q86X19 198 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 CLEC1AQ8NC01 280 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 CLRN3Q8NCR9 226 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 OR13C9Q8NGT0 318 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 ELP5Q8TE02 316 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 CTHRC1Q96CG8 243 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM41AQ96HV5 264 aa15.2■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM184BQ9Y519 407 aaPredicted RBP15.2■□□□□ 0.02
SGPP1-201ENST00000247225 IGHV3-20A0A0C4DH32 117 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 GNRH1P01148 92 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 ZNF823P16415 610 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 CNR1P21554 472 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 HRH1P35367 487 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 NPY4RP50391 375 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 RIDAP52758 137 aaKnown RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 ACTBP60709 375 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 ACTG1P63261 375 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 LY6G6FQ5SQ64 297 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 FJX1Q86VR8 437 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 ZNF578Q96N58 590 aaPredicted RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 BANF2Q9H503 90 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 RNF215Q9Y6U7 377 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 CPED1A4D0V7 1026 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 EFCAB7A8K855 629 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 HMSDA8MTL9 139 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 FBXO24O75426 580 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 IL11P20809 199 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 NFYBP25208 207 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SNTB1Q13884 538 aaKnown RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 GGTLC2Q14390 218 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 CLVS2Q5SYC1 327 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SLC18B1Q6NT16 456 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 OVCH2Q7RTZ1 564 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 CDC20BQ86Y33 519 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 NUP210Q8TEM1 1887 aaPredicted RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 C5orf34Q96MH7 638 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SMIM3Q9BZL3 60 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 NMNAT2Q9BZQ4 307 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SEMA6CQ9H3T2 930 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 MED29Q9NX70 200 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SLCO1B1Q9Y6L6 691 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 WDFY3Q8IZQ1 3526 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 KIAA1549LQ6ZVL6 1849 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM269A0A1B0GVZ9 245 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 MED19A0JLT2 244 aaPredicted RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 OR6C76A6NM76 312 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 ZNF208O43345 1280 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 AIMP2Q13155 320 aaKnown RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SERTAD2Q14140 314 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 SLC17A1Q14916 467 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 CARD17Q5XLA6 110 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 MARCH1Q8TCQ1 289 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 LCORQ96JN0 433 aaPredicted RBP15.19■□□□□ 0.02
SGPP1-201ENST00000247225 ABHD6Q9BV23 337 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 UBQLN4Q9NRR5 601 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 VSIG4Q9Y279 399 aa15.19■□□□□ 0.02
SGPP1-201ENST00000247225 PHF3Q92576 2039 aaKnown RBP15.18■□□□□ 0.02
SGPP1-201ENST00000247225 SFTPBP07988 381 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 HNRNPA2B1P22626 353 aaKnown RBP15.18■□□□□ 0.02
SGPP1-201ENST00000247225 MPGP29372 298 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 RASGEF1BQ0VAM2 473 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM240Q5SV17 173 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 PAPD4Q6PIY7 484 aaKnown RBP15.18■□□□□ 0.02
SGPP1-201ENST00000247225 EID2Q8N6I1 236 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 OR4D6Q8NGJ1 314 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 PHYHIPQ92561 330 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 FBXO17Q96EF6 278 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 CMSS1Q9BQ75 279 aaKnown RBP15.18■□□□□ 0.02
SGPP1-201ENST00000247225 ACKR4Q9NPB9 350 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 GDE1Q9NZC3 331 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 CYP8B1Q9UNU6 501 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 SDCBPO00560 298 aaPredicted RBP15.18■□□□□ 0.02
SGPP1-201ENST00000247225 ADAP1O75689 374 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 GLAP06280 429 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 PLEKHN1Q494U1 663 aaPredicted RBP15.18■□□□□ 0.02
SGPP1-201ENST00000247225 DCXRQ7Z4W1 244 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 C15orf40Q8WUR7 153 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 KLK13Q9UKR3 277 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 CSAG2Q9Y5P2 127 aa15.18■□□□□ 0.02
SGPP1-201ENST00000247225 PMS2P2O95744 297 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 ABHD16AO95870 558 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 TNFP01375 233 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 GFERP55789 205 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM151BQ8IW70 566 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 PUSL1Q8N0Z8 303 aaKnown RBP15.17■□□□□ 0.02
SGPP1-201ENST00000247225 OR2I1PQ8NGU4 316 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 OR6K3Q8NGY3 331 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 OTOSQ8NHW6 89 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 PTGES2Q9H7Z7 377 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 METTL8Q9H825 291 aaKnown RBP15.17■□□□□ 0.02
SGPP1-201ENST00000247225 TMEM14AQ9Y6G1 99 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 SLC17A2O00624 439 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 ZNF749O43361 778 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 HOXB5P09067 269 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 FCARP24071 287 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 IL10RAQ13651 578 aa15.17■□□□□ 0.02
SGPP1-201ENST00000247225 VWA2Q5GFL6 755 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms