RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CYB561A3Q8NBI2 242 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SLC37A3Q8NCC5 494 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SLC30A7Q8NEW0 376 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SDR9C7Q8NEX9 313 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 IL17RDQ8NFM7 739 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SLC26A10Q8NG04 563 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 OR52E2Q8NGJ4 325 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SLC7A6Q92536 515 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 PTP4A1Q93096 173 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 SORCS2Q96PQ0 1159 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 TSSK6Q9BXA6 273 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 MOV10Q9HCE1 1003 aaKnown RBP11.8□□□□□ -0.52
VEGFA-201ENST00000230480 PDP1Q9P0J1 537 aaPredicted RBP11.8□□□□□ -0.52
VEGFA-201ENST00000230480 POU2F3Q9UKI9 436 aa11.8□□□□□ -0.52
VEGFA-201ENST00000230480 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.523e-6■■□□□ 13.1
VEGFA-201ENST00000230480 H3BNX3 289 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 ICMTO60725 284 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 FARS2O95363 451 aaKnown RBP11.79□□□□□ -0.52
VEGFA-201ENST00000230480 RAB36O95755 333 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 CLPTM1O96005 669 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 CLUP10909 449 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 GSTT1P30711 240 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 DAPP51397 102 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.79□□□□□ -0.52
VEGFA-201ENST00000230480 GK3PQ14409 553 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 KRTAP27-1Q3LI81 207 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 SLC36A2Q495M3 483 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 SLC36A3Q495N2 470 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 FAHD1Q6P587 224 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 DPPA2Q7Z7J5 298 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 DEPDC4Q8N2C3 294 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 SVOPLQ8N434 492 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 IQCF1Q8N6M8 205 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 OR10S1Q8NGN2 331 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 NRG4Q8WWG1 115 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 MRPL24Q96A35 216 aaKnown RBP11.79□□□□□ -0.52
VEGFA-201ENST00000230480 Q96MF0 132 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 RACGAP1Q9H0H5 632 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 PNRC2Q9NPJ4 139 aaKnown RBP11.79□□□□□ -0.52
VEGFA-201ENST00000230480 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
VEGFA-201ENST00000230480 FZR1Q9UM11 496 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
VEGFA-201ENST00000230480 IGLV3-9A0A075B6K5 115 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 OR6C6A6NF89 314 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 XKRYO14609 159 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 RER1O15258 196 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 SYNGR3O43761 229 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 CD99P14209 185 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 STOMP27105 288 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 EPHA2P29317 976 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 PYCR1P32322 319 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 LSM6P62312 80 aaKnown RBP11.78□□□□□ -0.52
VEGFA-201ENST00000230480 CDK5Q00535 292 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 TNK1Q13470 666 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 CRMP1Q14194 572 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 ATP6AP1Q15904 470 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 TMEM53Q6P2H8 277 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 SHQ1Q6PI26 577 aaKnown RBP11.78□□□□□ -0.52
VEGFA-201ENST00000230480 VASH1Q7L8A9 365 aaPredicted RBP11.78□□□□□ -0.52
VEGFA-201ENST00000230480 AMIGO2Q86SJ2 522 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 SYT9Q86SS6 491 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 GLB1L2Q8IW92 636 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 OR10H5Q8NGA6 315 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 LRTOMTQ8WZ04 291 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 RNF121Q9H920 327 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
VEGFA-201ENST00000230480 TIMM10BQ9Y5J6 103 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 FKBP7Q9Y680 259 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
VEGFA-201ENST00000230480 B9A039 149 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 MITFO75030 526 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-201ENST00000230480 DBHP09172 617 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 ZNF250P15622 560 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 PCSK6P29122 969 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 RPS27P42677 84 aaKnown RBP11.77□□□□□ -0.53
VEGFA-201ENST00000230480 UCP2P55851 309 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 EFNB1P98172 346 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 HSF2Q03933 536 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 COX10Q12887 443 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 ALKBH6Q3KRA9 238 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 SLC18B1Q6NT16 456 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 CORO6Q6QEF8 472 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 RFPL4BQ6ZWI9 263 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 OR51L1Q8NGJ5 315 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 GTF3AQ92664 365 aaKnown RBP11.77□□□□□ -0.53
VEGFA-201ENST00000230480 MARS2Q96GW9 593 aaKnown RBP11.77□□□□□ -0.53
VEGFA-201ENST00000230480 MAP6Q96JE9 813 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 COX4I2Q96KJ9 171 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 RERGLQ9H628 205 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.53
VEGFA-201ENST00000230480 TMEFF2Q9UIK5 374 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-201ENST00000230480 IGHV4-30-2A0A087WSY4 118 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 C5orf63A6NC05 138 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 E9PQ18 207 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms