RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 HIKESHIQ53FT3 197 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 RBM48Q5RL73 367 aaKnown RBP10.77□□□□□ -0.69
LINC00339-213ENST00000642137 LYPD4Q6UWN0 246 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
LINC00339-213ENST00000642137 GJC3Q8NFK1 279 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 BPIFB6Q8NFQ5 453 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 OR51G2Q8NGK0 314 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 NANOS1Q8WY41 292 aaKnown RBP10.77□□□□□ -0.69
LINC00339-213ENST00000642137 GGHQ92820 318 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 S100PBPQ96BU1 408 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 RNFT2Q96EX2 444 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 MNTQ99583 582 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 ACTR6Q9GZN1 396 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 ADGRL4Q9HBW9 690 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 EMC7Q9NPA0 242 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 SCN3BQ9NY72 215 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 B3GNT2Q9NY97 397 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF224Q9NZL3 707 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 TIMM10BQ9Y5J6 103 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 COMMD3-BMI1R4GMX3 469 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 CFAP46Q8IYW2 2715 aa10.77□□□□□ -0.69
LINC00339-213ENST00000642137 SLC1A7O00341 560 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 UBL3O95164 117 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 MMP7P09237 267 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-213ENST00000642137 OR2T7P0C7T2 308 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 CBR1P16152 277 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 NUDT6P53370 316 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 RAB1AP62820 205 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 HIST1H3AP68431 136 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 HIST2H3PS2Q5TEC6 136 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 TMEM53Q6P2H8 277 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 HIST2H3AQ71DI3 136 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 DPY19L4Q7Z388 723 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 CDC20BQ86Y33 519 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 OR6N2Q8NGY6 317 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 OR2AJ1Q8NGZ0 328 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 OR2T27Q8NH04 317 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 OTOSQ8NHW6 89 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 HTRA1Q92743 480 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 MUCL1Q96DR8 90 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 LGALS12Q96DT0 336 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 CNN2Q99439 309 aaKnown RBP10.76□□□□□ -0.69
LINC00339-213ENST00000642137 RNF121Q9H920 327 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 MOV10Q9HCE1 1003 aaKnown RBP10.76□□□□□ -0.69
LINC00339-213ENST00000642137 FGF20Q9NP95 211 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-213ENST00000642137 CCNB1IP1Q9NPC3 277 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 CNOT2Q9NZN8 540 aaKnown RBP10.76□□□□□ -0.69
LINC00339-213ENST00000642137 NDRG3Q9UGV2 375 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 TPRKBQ9Y3C4 175 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 PCDHGB5Q9Y5G0 923 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-213ENST00000642137 SLC25A15Q9Y619 301 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 LHFPL6Q9Y693 200 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 TMEM14AQ9Y6G1 99 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 CHD6Q8TD26 2715 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF462Q96JM2 2506 aa10.76□□□□□ -0.69
LINC00339-213ENST00000642137 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 J3QRE1 110 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 PHYHO14832 338 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 XPNPEP2O43895 674 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 SELENOFO60613 162 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 FAM20BO75063 409 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 FADS2O95864 444 aaKnown RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 MRPL3P09001 348 aaKnown RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 CD79AP11912 226 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF32P17041 273 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ALOX5APP20292 161 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 DCKP27707 260 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 CCKARP32238 428 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 NAA10P41227 235 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 CAPZA2P47755 286 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 SCRN3Q0VDG4 424 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 OTPQ5XKR4 325 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 SLC18B1Q6NT16 456 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 RHOUQ7L0Q8 258 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 SLC35F2Q8IXU6 374 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 FAM169BQ8N8A8 192 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF540Q8NDQ6 660 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 OR4F15Q8NGB8 312 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 FGFBP3Q8TAT2 258 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 IPCEF1Q8WWN9 437 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF75AQ96N20 296 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 WFIKKN1Q96NZ8 548 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 FKBP14Q9NWM8 211 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ASH2LQ9UBL3 628 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 PSORS1C1Q9UIG5 152 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 GDF2Q9UK05 429 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-213ENST00000642137 LRCH1Q9Y2L9 728 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 POLR1DQ9Y2S0 133 aa10.75□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF503-AS2A6NEH8 195 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF670-ZNF695F2Z2N8 137 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 PTHP01270 115 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 HLA-HP01893 362 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms