RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 PTCHD4Q6ZW05 846 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 OR9Q2Q8NGE9 314 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 IPCEF1Q8WWN9 437 aaPredicted RBP12.3□□□□□ -0.44
SDHD-209ENST00000640554 NEU4Q8WWR8 484 aaPredicted RBP12.3□□□□□ -0.44
SDHD-209ENST00000640554 C11orf40Q8WZ69 217 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 POM121L2Q96KW2 1035 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 ZNF416Q9BWM5 594 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 DNAJB9Q9UBS3 223 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 ATPIF1Q9UII2 106 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 U3KQV3 271 aa12.3□□□□□ -0.44
SDHD-209ENST00000640554 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 SSX4O60224 188 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 ICMTO60725 284 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 HIST1H1CP16403 213 aaKnown RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 APEX1P27695 318 aaKnown RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 ENDOGQ14249 297 aaKnown RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 LEG1Q6P5S2 330 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 ZBTB46Q86UZ6 589 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 LNX2Q8N448 690 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 CPEB3Q8NE35 698 aaKnown RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 OR2T33Q8NG76 320 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 OR10G2Q8NGC3 310 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 OR4K13Q8NH42 304 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 HTRA1Q92743 480 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 NRBF2Q96F24 287 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 NMNAT3Q96T66 252 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 WNT5BQ9H1J7 359 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 RERGLQ9H628 205 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 ZNF556Q9HAH1 456 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 SLCO1C1Q9NYB5 712 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 GDF2Q9UK05 429 aaPredicted RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 B9D1Q9UPM9 204 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 COA3Q9Y2R0 106 aaPredicted RBP12.29□□□□□ -0.44
SDHD-209ENST00000640554 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
SDHD-209ENST00000640554 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
SDHD-209ENST00000640554 H3BSA7 217 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 H7C1Q1 480 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 NDUFS8O00217 210 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 BHLHE40O14503 412 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 NDUFS7O75251 213 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 FKBP6O75344 327 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
SDHD-209ENST00000640554 E2F6O75461 281 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 IFNGP01579 166 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 ANXA8P13928 327 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 ZNF250P15622 560 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 CENPAP49450 140 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 CBX1P83916 185 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 TNK1Q13470 666 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 ZNF540Q8NDQ6 660 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 OR52E2Q8NGJ4 325 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 OR2T4Q8NH00 348 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 DNAJC9Q8WXX5 260 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 COG8Q96MW5 612 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 FEVQ99581 238 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 VRK1Q99986 396 aaPredicted RBP12.28□□□□□ -0.44
SDHD-209ENST00000640554 TSSK6Q9BXA6 273 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 REG4Q9BYZ8 158 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 EGLN3Q9H6Z9 239 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 SRA1Q9HD15 236 aaKnown RBP12.28□□□□□ -0.44
SDHD-209ENST00000640554 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 TBC1D23Q9NUY8 699 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 VNN3Q9NY84 501 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 KCNG2Q9UJ96 466 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 KLHL21Q9UJP4 597 aa12.28□□□□□ -0.44
SDHD-209ENST00000640554 IGLV1-36A0A0B4J1U3 117 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 C5orf49A4QMS7 147 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 J3QW42 95 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 M0R233 179 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 SGCEO43556 437 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 LCKP06239 509 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 SLC25A16P16260 332 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 CCNOP22674 350 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 BLVRAP53004 296 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.27□□□□□ -0.45
SDHD-209ENST00000640554 PPP1R8Q12972 351 aaKnown RBP12.27□□□□□ -0.45
SDHD-209ENST00000640554 ZNF718Q3SXZ3 478 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 CLEC12AQ5QGZ9 265 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 NPEPL1Q8NDH3 523 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 AKR7LQ8NHP1 331 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 SYNPRQ8TBG9 265 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 DCLRE1CQ96SD1 692 aaKnown RBP12.27□□□□□ -0.45
SDHD-209ENST00000640554 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.45
SDHD-209ENST00000640554 EMC7Q9NPA0 242 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 PDP1Q9P0J1 537 aaPredicted RBP12.27□□□□□ -0.45
SDHD-209ENST00000640554 REV1Q9UBZ9 1251 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 POLR1DQ9Y2S0 133 aa12.27□□□□□ -0.45
SDHD-209ENST00000640554 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
SDHD-209ENST00000640554 LOC100509620A0A075B734 347 aa12.26□□□□□ -0.45
SDHD-209ENST00000640554 LOC390937A0A1W2PQ73 354 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms