RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 B3GLCTQ6Y288 498 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 LINC00346Q8IVM7 164 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 FAM169BQ8N8A8 192 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 KBTBD8Q8NFY9 601 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 OR6K6Q8NGW6 343 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 AKR7LQ8NHP1 331 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 HRASLS5Q96KN8 279 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 WNT5BQ9H1J7 359 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 CLEC4MQ9H2X3 399 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-209ENST00000640289 WDR76Q9H967 626 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 SMPD3Q9NY59 655 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-209ENST00000640289 ASH2LQ9UBL3 628 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 POLR1DQ9Y2S0 133 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 RNF115Q9Y4L5 304 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 BAHCC1Q9P281 2608 aa11.47□□□□□ -0.57
GTF3A-209ENST00000640289 UTP20O75691 2785 aaKnown RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 C12orf71A8MTZ7 269 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 SHISA9B4DS77 424 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 GLCEO94923 617 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 ATP6V1G2O95670 118 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 CCL2P13500 99 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 SLC2A5P22732 501 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 PAX7P23759 505 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 FMO3P31513 532 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 GGT2P36268 569 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 CDC42P60953 191 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 LSM6P62312 80 aaKnown RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 NAAAQ02083 359 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 AQP6Q13520 282 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF774Q6NX45 483 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 CORO6Q6QEF8 472 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF704Q6ZNC4 412 aaPredicted RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 DPPA2Q7Z7J5 298 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 CDC20BQ86Y33 519 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 PACRGLQ8N7B6 248 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 CPEB3Q8NE35 698 aaKnown RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 LILRB1Q8NHL6 650 aaPredicted RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 FAM81AQ8TBF8 368 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 TMEM163Q8TC26 289 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 UBE2FQ969M7 185 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 ZMYND19Q96E35 227 aaPredicted RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 RADILQ96JH8 1075 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 TMEM204Q9BSN7 226 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 OR2H1Q9GZK4 316 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 FAM118AQ9NWS6 357 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 NDRG4Q9ULP0 352 aaKnown RBP11.46□□□□□ -0.57
GTF3A-209ENST00000640289 MOKQ9UQ07 419 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 TIMM10BQ9Y5J6 103 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 GMPPBQ9Y5P6 360 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 LHFPL6Q9Y693 200 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 COMMD3-BMI1R4GMX3 469 aa11.46□□□□□ -0.57
GTF3A-209ENST00000640289 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 ATP6V1G2-DDX39BF2Z307 99 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 RER1O15258 196 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 PRODHO43272 600 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 SERPINA5P05154 406 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 APEX1P27695 318 aaKnown RBP11.45□□□□□ -0.58
GTF3A-209ENST00000640289 PCBD1P61457 104 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 RPS7P62081 194 aaKnown RBP11.45□□□□□ -0.58
GTF3A-209ENST00000640289 ADAM8P78325 824 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 PLP2Q04941 152 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 APOFQ13790 326 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 C3orf36Q3SXR2 165 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 AADACL4Q5VUY2 407 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 SLC22A25Q6T423 547 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 SYT9Q86SS6 491 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 NRGNQ92686 78 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 PITX2Q99697 317 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 CDADC1Q9BWV3 514 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 MOV10Q9HCE1 1003 aaKnown RBP11.45□□□□□ -0.58
GTF3A-209ENST00000640289 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
GTF3A-209ENST00000640289 IGHV2OR16-5A0A0B4J2B6 119 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 LOC100130705A0A1B0GUX0 176 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 IQCMA0A1B0GVH7 501 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 SGCEO43556 437 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 DOK2O60496 412 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 SELENOFO60613 162 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 CRYAAP02489 173 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 ZNF823P16415 610 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 GSTT1P30711 240 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 ENTPD1P49961 510 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 SCRN3Q0VDG4 424 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 RIPK1Q13546 671 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 CCDC92Q53HC0 331 aaPredicted RBP11.44□□□□□ -0.58
GTF3A-209ENST00000640289 SLC35D3Q5M8T2 416 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 NXNL2Q5VZ03 156 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 TMEM154Q6P9G4 183 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 CFAP77Q6ZQR2 320 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 ERI1Q8IV48 349 aaKnown RBP11.44□□□□□ -0.58
GTF3A-209ENST00000640289 PAQR4Q8N4S7 273 aaPredicted RBP11.44□□□□□ -0.58
GTF3A-209ENST00000640289 SLC30A7Q8NEW0 376 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 OR8J1Q8NGP2 316 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 AKAP1Q92667 903 aaKnown RBP eCLIP11.44□□□□□ -0.58
GTF3A-209ENST00000640289 RDH12Q96NR8 316 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 TEAD3Q99594 435 aa11.44□□□□□ -0.58
GTF3A-209ENST00000640289 KCNS3Q9BQ31 491 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms